RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 LRRC27Q9C0I9 530 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 CGNQ9P2M7 1197 aaKnown RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 TFIP11Q9UBB9 837 aaKnown RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 HESX1Q9UBX0 185 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 ERRFI1Q9UJM3 462 aaPredicted RBP10.45□□□□□ -0.74
CDHR3-209ENST00000472116 APPL1Q9UKG1 709 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 ITGB1BP2Q9UKP3 347 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 MAP4K5Q9Y4K4 846 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 B3GALT1Q9Y5Z6 326 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 HIVEP1P15822 2718 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 CCDC168Q8NDH2 2452 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 SPG11Q96JI7 2443 aa10.45□□□□□ -0.74
CDHR3-209ENST00000472116 YJEFN3A6XGL0 299 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 E7ENQ6 273 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 F5H5T6 163 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 XPO1O14980 1071 aaKnown RBP10.44□□□□□ -0.74
CDHR3-209ENST00000472116 INPP4BO15327 924 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 CSTF2P33240 577 aaKnown RBP eCLIP10.44□□□□□ -0.743e-7■■■■■ 32.3
CDHR3-209ENST00000472116 PLK1P53350 603 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 RAB15P59190 212 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 PFN3P60673 137 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 MRPL49Q13405 166 aaKnown RBP10.44□□□□□ -0.74
CDHR3-209ENST00000472116 TCEA2Q15560 299 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 ZACNQ401N2 412 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 CRTC2Q53ET0 693 aaPredicted RBP10.44□□□□□ -0.74
CDHR3-209ENST00000472116 TPRG1LQ5T0D9 272 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 DCAF12Q5T6F0 453 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 TTC39BQ5VTQ0 682 aaPredicted RBP10.44□□□□□ -0.74
CDHR3-209ENST00000472116 MACC1Q6ZN28 852 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 HID1Q8IV36 788 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 NELFCDQ8IXH7 590 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 SH2D3CQ8N5H7 860 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 GRIN3AQ8TCU5 1115 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 PARD3BQ8TEW8 1205 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 ART4Q93070 314 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 ZSCAN31Q96LW9 406 aaPredicted RBP10.44□□□□□ -0.74
CDHR3-209ENST00000472116 C1QTNF7Q9BXJ2 289 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 EDEM3Q9BZQ6 932 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 NIF3L1Q9GZT8 377 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 SEMA6CQ9H3T2 930 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 CNGB3Q9NQW8 809 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 SLC39A1Q9NY26 324 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 IL36AQ9UHA7 158 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 VPS28Q9UK41 221 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 ENTPD4Q9Y227 616 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 DAAM1Q9Y4D1 1078 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 KCNMB2Q9Y691 235 aa10.44□□□□□ -0.74
CDHR3-209ENST00000472116 PRRC2CQ9Y520 2896 aaKnown RBP10.44□□□□□ -0.74
CDHR3-209ENST00000472116 TCP11X1B4DZS4 312 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 K7EM74 188 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 TOR1BO14657 336 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 TGFB1I1O43294 461 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 RASGRP1O95267 797 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 HLA-DRAP01903 254 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 CTSLP07711 333 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 CELA2BP08218 269 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 FGF3P11487 239 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 ADRB3P13945 408 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 HK3P52790 923 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 CLDN10P78369 228 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 CLPPQ16740 277 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 ARHGAP44Q17R89 818 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 AMZ1Q400G9 498 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 RABGAP1LQ5R372 815 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 CERCAMQ5T4B2 595 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 RAP1GAP2Q684P5 730 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 BHLHA9Q7RTU4 235 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 RD3Q7Z3Z2 195 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 FAM129CQ86XR2 697 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 MCEMP1Q8IX19 187 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 CCAR2Q8N163 923 aaKnown RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 ATP11CQ8NB49 1132 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 AGBL5Q8NDL9 886 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 RCBTB1Q8NDN9 531 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 ATL2Q8NHH9 583 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 ZNF507Q8TCN5 953 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 RNF166Q96A37 237 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 MYEOVQ96EZ4 313 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 TEFMQ96QE5 360 aaKnown RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 TRIT1Q9H3H1 467 aaKnown RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 RDH14Q9HBH5 336 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 CYP4F12Q9HCS2 524 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 LRIT1Q9P2V4 623 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 TLR6Q9Y2C9 796 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 PDZD2O15018 2839 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 NF1P21359 2839 aa10.43□□□□□ -0.74
CDHR3-209ENST00000472116 SPENQ96T58 3664 aaKnown RBP10.43□□□□□ -0.74
CDHR3-209ENST00000472116 TCAF2A6NFQ2 919 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 IGLON5A6NGN9 336 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 TSPAN6O43657 245 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 EIF5BO60841 1220 aaKnown RBP10.42□□□□□ -0.74
CDHR3-209ENST00000472116 DIAPH2O60879 1101 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 LCP1P13796 627 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 PRF1P14222 555 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 TACR2P21452 398 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 HTR1BP28222 390 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 HOXD13P35453 343 aa10.42□□□□□ -0.74
CDHR3-209ENST00000472116 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
CDHR3-209ENST00000472116 KRT83P78385 493 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms