RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 MMP20O60882 483 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 PPP6R2O75170 966 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 CNTN5O94779 1100 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 FYNP06241 537 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 ALPIP09923 528 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 CCL4P13236 92 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 KRT5P13647 590 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 NR1D1P20393 614 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 COL8A1P27658 744 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 ALDH4A1P30038 563 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 GKP32189 559 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 CCR1P32246 355 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 GTF2H1P32780 548 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 EIF4A3P38919 411 aaKnown RBP7□□□□□ -1.29
HDAC1-204ENST00000471488 UQCRFS1P47985 274 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 NASPP49321 788 aaPredicted RBP7□□□□□ -1.29
HDAC1-204ENST00000471488 PLK1P53350 603 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 CDK17Q00537 523 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 AUHQ13825 339 aaKnown RBP7□□□□□ -1.29
HDAC1-204ENST00000471488 ELOCQ15369 112 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 DEFB109BQ30KR1 87 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 CBWD6Q4V339 395 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 CBWD3Q5JTY5 395 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 CBWD5Q5RIA9 395 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 FHL5Q5TD97 284 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 ZNF787Q6DD87 383 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 LCLAT1Q6UWP7 414 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 ENPP7Q6UWV6 458 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 LEKR1Q6ZMV7 388 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 PARS2Q7L3T8 475 aaKnown RBP7□□□□□ -1.29
HDAC1-204ENST00000471488 KDELC2Q7Z4H8 507 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 GKN2Q86XP6 184 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 ZNF354CQ86Y25 554 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 PPM1KQ8N3J5 372 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 EFCAB3Q8N7B9 438 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 TEX19Q8NA77 164 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 SLC35F5Q8WV83 523 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 RNF31Q96EP0 1072 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 PAGE5Q96GU1 130 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 SLC39A13Q96H72 371 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 PHF12Q96QT6 1004 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 TRIM62Q9BVG3 475 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 HDAC8Q9BY41 377 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 SEMA6CQ9H3T2 930 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 POPDC2Q9HBU9 364 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7□□□□□ -1.29
HDAC1-204ENST00000471488 VPS51Q9UID3 782 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 PNMA8BQ9ULN7 279 aaPredicted RBP7□□□□□ -1.29
HDAC1-204ENST00000471488 MTMR6Q9Y217 621 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 FADS3Q9Y5Q0 445 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 SNX10Q9Y5X0 201 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 RP1P56715 2156 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 COL27A1Q8IZC6 1860 aaPredicted RBP7□□□□□ -1.29
HDAC1-204ENST00000471488 RELNP78509 3460 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 BSNQ9UPA5 3926 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 A0A0D9SEW6 157 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 A0A1W2PQ27 194 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 A0A1W2PQ64 194 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 A0A1W2PQC6 194 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 PRR19A6NJB7 356 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 EFCAB7A8K855 629 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 ZNF891A8MT65 544 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 E5RJQ4 531 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 KRIT1O00522 736 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 RIOK3O14730 519 aaKnown RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 MAPK13O15264 365 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 NKX2-8O15522 239 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SART1O43290 800 aaKnown RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 DUX1O43812 170 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SRGAP2O75044 1071 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 CLDN11O75508 207 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 RASGRP1O95267 797 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 PRR29P0C7W0 189 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SLC2A3P11169 496 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 GNLYP22749 145 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 XPAP23025 273 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 TBXAS1P24557 533 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 MPSTP25325 297 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 ITGB7P26010 798 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 L1CAMP32004 1257 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 CCKBRP32239 447 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 IGFALSP35858 605 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 BLKP51451 505 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 CCNHP51946 323 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 YWHAZP63104 245 aaKnown RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 NNTQ13423 1086 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SEPT6Q14141 434 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 TAF5Q15542 800 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 KLHL40Q2TBA0 621 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 LACTB2Q53H82 288 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 DENND1BQ6P3S1 775 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 MACC1Q6ZN28 852 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 RRAGAQ7L523 313 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 TMPRSS9Q7Z410 1059 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 TAF8Q7Z7C8 310 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 PIM3Q86V86 326 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 FAM129CQ86XR2 697 aa6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SRRM1Q8IYB3 904 aaKnown RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 SMYD4Q8IYR2 804 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-204ENST00000471488 UNC5BQ8IZJ1 945 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms