RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.97□□□□□ -1.45
CCDC39-202ENST00000471307 LRFN1Q9P244 771 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 PTGDR2Q9Y5Y4 395 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 MYO5BQ9ULV0 1848 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 ADGRF5Q8IZF2 1346 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 TMEM2Q9UHN6 1383 aa5.96□□□□□ -1.45
CCDC39-202ENST00000471307 PPLO60437 1756 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 C17orf102A2RUQ5 167 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 VWA5AO00534 786 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 SEPT4O43236 478 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 FGF3P11487 239 aaPredicted RBP5.96□□□□□ -1.46
CCDC39-202ENST00000471307 CHN1P15882 459 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 RPS6KA3P51812 740 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 UBE4AQ14139 1066 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 FNBP1LQ5T0N5 605 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 CACNA2D3Q8IZS8 1091 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 TRAPPC9Q96Q05 1148 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 IFT27Q9BW83 186 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 OSGIN2Q9Y236 505 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 RAP2CQ9Y3L5 183 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 MST1RQ04912 1400 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 RIMS2Q9UQ26 1411 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 UBR1Q8IWV7 1749 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 IFT172Q9UG01 1749 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 NRXN1Q9ULB1 1477 aa5.96□□□□□ -1.46
CCDC39-202ENST00000471307 ROCK2O75116 1388 aaKnown RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 NEXMIFQ5QGS0 1516 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 FAM90A20PA6NIJ5 464 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 STMND1H3BQB6 276 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 RNMTO43148 476 aaKnown RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 KIF1CO43896 1103 aaKnown RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 TFRCP02786 760 aaKnown RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 CYP21A2P08686 494 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 ACAA1P09110 424 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 FCGR2AP12318 317 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 PLA2G2AP14555 144 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 GNLYP22749 145 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 TRAF2Q12933 501 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 TRAF1Q13077 416 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 PKP1Q13835 747 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 BRD3Q15059 726 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 INO80DQ53TQ3 878 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 SULT6B1Q6IMI4 303 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 CAPRIN2Q6IMN6 1127 aaKnown RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 HEPHL1Q6MZM0 1159 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 C8orf82Q6P1X6 216 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 C1orf228Q6PIY5 440 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 VPS52Q8N1B4 723 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 SAMD3Q8N6K7 520 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 FSIP1Q8NA03 581 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 OR6Y1Q8NGX8 325 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 NUDCD2Q8WVJ2 157 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 FAR1Q8WVX9 515 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 KCNJ9Q92806 393 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 LTV1Q96GA3 475 aaPredicted RBP5.95□□□□□ -1.46
CCDC39-202ENST00000471307 KIAA1210Q9ULL0 1709 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 RCE1Q9Y256 329 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 RAI2Q9Y5P3 530 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 RALGAPBQ86X10 1494 aa5.95□□□□□ -1.46
CCDC39-202ENST00000471307 GPRASP1Q5JY77 1395 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 PIK3C2GO75747 1445 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 GLUD1P00367 558 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 MMP3P08254 477 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 CYP4B1P13584 511 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 CST5P28325 142 aaPredicted RBP5.94□□□□□ -1.46
CCDC39-202ENST00000471307 AVPR1AP37288 418 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 GLUD2P49448 558 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 CLCNKBP51801 687 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 MORC3Q14149 939 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 SMAD1Q15797 465 aaKnown RBP5.94□□□□□ -1.46
CCDC39-202ENST00000471307 FSCBQ5H9T9 825 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 TMEM71Q6P5X7 295 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 RASGRP2Q7LDG7 609 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 DCP1BQ8IZD4 617 aaKnown RBP5.94□□□□□ -1.46
CCDC39-202ENST00000471307 C2CD4CQ8TF44 421 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 TEFMQ96QE5 360 aaKnown RBP5.94□□□□□ -1.46
CCDC39-202ENST00000471307 POLDIP3Q9BY77 421 aaKnown RBP5.94□□□□□ -1.46
CCDC39-202ENST00000471307 G6PC2Q9NQR9 355 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 IL36RNQ9UBH0 155 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 TRPM1Q7Z4N2 1603 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 MYO3AQ8NEV4 1616 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 ARHGAP23Q9P227 1491 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 SLIT1O75093 1534 aa5.94□□□□□ -1.46
CCDC39-202ENST00000471307 CEP170BQ9Y4F5 1589 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 A0A1B0GVT2 93 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 H0Y3Z8 333 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 I6L893 689 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 DDAH2O95865 285 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 HSPA5P11021 654 aaKnown RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 ENO3P13929 434 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 PNPLA4P41247 253 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 RFX5P48382 616 aaPredicted RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 PCYT1AP49585 367 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 ABATP80404 500 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 SHBQ15464 509 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 TMEM268Q5VZI3 342 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 RNF144BQ7Z419 303 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 RBM23Q86U06 439 aaKnown RBP5.93□□□□□ -1.46
CCDC39-202ENST00000471307 HORMAD2Q8N7B1 307 aa5.93□□□□□ -1.46
CCDC39-202ENST00000471307 RBMXL3Q8N7X1 1067 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms