RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 TASP1Q9H6P5 420 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 LRRC40Q9H9A6 602 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 SEMA4GQ9NTN9 838 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 THG1LQ9NWX6 298 aaKnown RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 KLHL8Q9P2G9 620 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 IPO11Q9UI26 975 aaKnown RBP9.32□□□□□ -0.92
PTPRE-207ENST00000471218 SLC24A2Q9UI40 661 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 VANGL2Q9ULK5 521 aa9.32□□□□□ -0.92
PTPRE-207ENST00000471218 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-207ENST00000471218 MAGEB16A2A368 324 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 DCDC2BA2VCK2 349 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 RASA4BC9J798 803 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 RASA4O43374 803 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 GREM1O60565 184 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 PRAMEF11O60813 436 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 TMEM63AO94886 807 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 AGTP01019 485 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 CHRNB1P11230 501 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ETS1P14921 441 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 OR1E1P30953 314 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 STX2P32856 288 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 MMP13P45452 471 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 CDR1P51861 262 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 LIMK1P53667 647 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 GEMP55040 296 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF844Q08AG5 666 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 FCHO2Q0JRZ9 810 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 SPEM2Q0P670 501 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 SLC12A1Q13621 1099 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 POLD3Q15054 466 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ST3GAL2Q16842 350 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 KLHL38Q2WGJ6 581 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 PPM1JQ5JR12 505 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 RAP1GAP2Q684P5 730 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 NADSYN1Q6IA69 706 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 TSSK4Q6SA08 328 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 VITQ6UXI7 678 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 PRR23CQ6ZRP0 262 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 GAREM2Q75VX8 874 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 CEP68Q76N32 757 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 C14orf80Q86SX3 495 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 CCDC25Q86WR0 208 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ST13P5Q8NFI4 369 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-207ENST00000471218 CCDC110Q8TBZ0 833 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 PYROXD1Q8WU10 500 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 SLC25A51Q9H1U9 297 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ETNK1Q9HBU6 452 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 SAYSD1Q9NPB0 183 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 NINJ2Q9NZG7 142 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 SENP1Q9P0U3 644 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 TBC1D14Q9P2M4 693 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 LGALS13Q9UHV8 139 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 NUDT5Q9UKK9 219 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 AGO1Q9UL18 857 aaKnown RBP9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ACTL7BQ9Y614 415 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 TEX264Q9Y6I9 313 aa9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF638Q14966 1978 aaKnown RBP9.31□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 C2orf78A6NCI8 922 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 HEPACAM2A8MVW5 462 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 SLC9A3R1O14745 358 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 RASGRF2O14827 1237 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 RNF40O75150 1001 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 SYF2O95926 243 aaKnown RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 EPOP01588 193 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 CKMP06732 381 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 MYL4P12829 197 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 TDGF1P13385 188 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 FCARP24071 287 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 NPY2RP49146 381 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 PDIA2Q13087 525 aaKnown RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 ZNF177Q13360 481 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 MPP3Q13368 585 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 LAMB3Q13751 1172 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 GRM2Q14416 872 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 SLC29A2Q14542 456 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 INO80DQ53TQ3 878 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 TNFAIP8L3Q5GJ75 292 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 MARC1Q5VT66 337 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 ANKRD22Q5VYY1 191 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 KCTD11Q693B1 232 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 PID1Q7Z2X4 250 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 ZBED8Q8IZ13 594 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 LGI2Q8N0V4 545 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 SPOCK2Q92563 424 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 ATP6V1G3Q96LB4 118 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 GDAP1L1Q96MZ0 367 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 ACE2Q9BYF1 805 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 MAGEB5Q9BZ81 275 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 SLC39A8Q9C0K1 460 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 IL22Q9GZX6 179 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 ACSS3Q9H6R3 686 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 NOL6Q9H6R4 1146 aaKnown RBP9.3□□□□□ -0.92
PTPRE-207ENST00000471218 SP110Q9HB58 689 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 TMBIM4Q9HC24 238 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 GLOD4Q9HC38 313 aa9.3□□□□□ -0.92
PTPRE-207ENST00000471218 RSPH14Q9UHP6 348 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms