RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 SULT2A1Q06520 285 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 CYTH1Q15438 398 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 KIAA0319Q5VV43 1072 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 OSTM1Q86WC4 334 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 KLHDC8BQ8IXV7 354 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 DNAAF3Q8N9W5 541 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 DUS3LQ96G46 650 aaKnown RBP10.42□□□□□ -0.74
SMC4-210ENST00000469762 HSFY1Q96LI6 401 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 SLC2A13Q96QE2 648 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 CAMKK2Q96RR4 588 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 TMEM30AQ9NV96 361 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 CACNA2D2Q9NY47 1150 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 SUCOQ9UBS9 1254 aaKnown RBP10.42□□□□□ -0.74
SMC4-210ENST00000469762 ZNF510Q9Y2H8 683 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 ZSCAN9O15535 394 aaPredicted RBP10.42□□□□□ -0.74
SMC4-210ENST00000469762 DDHD2O94830 711 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 H6PDO95479 791 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 PSMC3P17980 439 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 STT3AP46977 705 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 ARCN1P48444 511 aaKnown RBP10.42□□□□□ -0.74
SMC4-210ENST00000469762 HK2P52789 917 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 GJA9P57773 515 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 NME3Q13232 169 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 NXNQ6DKJ4 435 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 KLHL35Q6PF15 583 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 LRRC52Q8N7C0 313 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 DDI1Q8WTU0 396 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 LPGAT1Q92604 370 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 C16orf70Q9BSU1 422 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 KIFC1Q9BW19 673 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 RHOJQ9H4E5 214 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 RHBDL2Q9NX52 303 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 VTI1BQ9UEU0 232 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 CIDEBQ9UHD4 219 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 AP4S1Q9Y587 144 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 ZNF236Q9UL36 1845 aa10.42□□□□□ -0.74
SMC4-210ENST00000469762 FAM155AB1AL88 458 aaPredicted RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 H0YJX3 145 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 EEF2KO00418 725 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 AURKAO14965 403 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 ZNF286BP0CG31 522 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 HNRNPLP14866 589 aaKnown RBP eCLIP10.41□□□□□ -0.742e-15■■■■■ 47.4
SMC4-210ENST00000469762 NOS2P35228 1153 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 ADRA1BP35368 520 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 SOX4Q06945 474 aaPredicted RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 CTBP1Q13363 440 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 ART3Q13508 389 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 ZNF484Q5JVG2 852 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 ARTNQ5T4W7 220 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 KLC3Q6P597 504 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 SETD3Q86TU7 594 aaPredicted RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 FIBCD1Q8N539 461 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 PNPLA1Q8N8W4 532 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 FAM149B1Q96BN6 582 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 HSPBAP1Q96EW2 488 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 CIB1Q99828 191 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 GOLGA2P5Q9HBQ8 144 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 SOCS2O14508 198 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 GNAO1P09471 354 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 CKMT2P17540 419 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 GNL1P36915 607 aaPredicted RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 CDK9P50750 372 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 DENND5AQ6IQ26 1287 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 OTOP3Q7RTS5 596 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 EME1Q96AY2 570 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 LRCH3Q96II8 777 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 DNAI2Q9GZS0 605 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 UTP6Q9NYH9 597 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 RBPJLQ9UBG7 517 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 SFMBT1Q9UHJ3 866 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 IPO11Q9UI26 975 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 ANKRD6Q9Y2G4 727 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 COL4A4P53420 1690 aaPredicted RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 TRIM64CA6NLI5 447 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 XPO1O14980 1071 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 HSPA13P48723 471 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 USP10Q14694 798 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 KYAT1Q16773 422 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 SH2D4BQ5SQS7 431 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 DHRS4L2Q6PKH6 230 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 HERC6Q8IVU3 1022 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 CNTN4Q8IWV2 1026 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 NXF3Q9H4D5 531 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 RSL24D1Q9UHA3 163 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 MTF2Q9Y483 593 aaPredicted RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 HTRA2O43464 458 aaPredicted RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 CACNG3O60359 315 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 APOA4P06727 396 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 CCDC166P0CW27 439 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 DESP17661 470 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 ADARP55265 1226 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 REP15Q6BDI9 236 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 POTEHQ6S545 545 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 ERI1Q8IV48 349 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 SPATA22Q8NHS9 363 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 HDAC11Q96DB2 347 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 SLC39A3Q9BRY0 314 aa10.41□□□□□ -0.74
SMC4-210ENST00000469762 NOL11Q9H8H0 719 aaKnown RBP10.41□□□□□ -0.74
SMC4-210ENST00000469762 ADA2Q9NZK5 511 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms