RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 VOPP1Q96AW1 172 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 EXOC2Q96KP1 924 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 KLHL32Q96NJ5 620 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 DNAJC7Q99615 494 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 CHP1Q99653 195 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 HDAC8Q9BY41 377 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 DEF6Q9H4E7 631 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 PREBQ9HCU5 417 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 FZD3Q9NPG1 666 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 ZNHIT6Q9NWK9 470 aaKnown RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 CTTNBP2NLQ9P2B4 639 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 UBA2Q9UBT2 640 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 IP6K2Q9UHH9 426 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 NENFQ9UMX5 172 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 ZFR2Q9UPR6 939 aaKnown RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 PCDHB9Q9Y5E1 797 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 WDR87Q6ZQQ6 2873 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 CXorf51AA0A1B0GTR3 108 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 EIF3CLB5ME19 914 aaKnown RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 MYO1FO00160 1098 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 TLR4O00206 839 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 UGT2B4P06133 528 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ITIH2P19823 946 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ITGB7P26010 798 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 PMLP29590 882 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 HTR7P34969 479 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ABL2P42684 1182 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 TRIM14Q14142 442 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 STAT4Q14765 748 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 TRIP6Q15654 476 aaKnown RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ASTE1Q2TB18 679 aaPredicted RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ZNF284Q2VY69 593 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ATP13A4Q4VNC1 1196 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 BOLA3Q53S33 107 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 INO80DQ53TQ3 878 aaPredicted RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 SLC45A4Q5BKX6 768 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ZNF805Q5CZA5 627 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 LRRC73Q5JTD7 316 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 GDPD4Q6W3E5 623 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 HORMAD1Q86X24 394 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 GATAD2AQ86YP4 633 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 PSTKQ8IV42 348 aaKnown RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ARHGAP12Q8IWW6 846 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 NPWQ8N729 165 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ZNF564Q8TBZ8 553 aaPredicted RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 RHBDD1Q8TEB9 315 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 GDAP1L1Q96MZ0 367 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 EIF3CQ99613 913 aaKnown RBP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 NCAPGQ9BPX3 1015 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 PDFQ9HBH1 243 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ABHD10Q9NUJ1 306 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDHR3-205ENST00000468143 SPTLC3Q9NUV7 552 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ETNK2Q9NVF9 386 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 LHX3Q9UBR4 397 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 GGT7Q9UJ14 662 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ITM2BQ9Y287 266 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 BTBD3Q9Y2F9 522 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 FADS3Q9Y5Q0 445 aa11.72□□□□□ -0.53
CDHR3-205ENST00000468143 ARHGAP42A6NI28 874 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 PRAMEF26H0Y7S4 382 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 H3BRJ5 948 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 AKR1B10O60218 316 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 PRAMEF11O60813 436 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 MFAP3LO75121 409 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 PIGNO95427 931 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 IGSF6O95976 241 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 PAK4O96013 591 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-205ENST00000468143 TPM1P09493 284 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 GJC1P36383 396 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 ARL4AP40617 200 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 HCAR3P49019 387 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 CLDN2P57739 230 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 NXPH1P58417 271 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 DPYSQ14117 519 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 SUZ12Q15022 739 aaKnown RBP11.71□□□□□ -0.53
CDHR3-205ENST00000468143 ZNF423Q2M1K9 1284 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 SETMARQ53H47 684 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-205ENST00000468143 AFMIDQ63HM1 303 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 NEK5Q6P3R8 708 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 POLNQ7Z5Q5 900 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 TTC7BQ86TV6 843 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 SPATS2Q86XZ4 545 aaKnown RBP11.71□□□□□ -0.53
CDHR3-205ENST00000468143 PNPLA1Q8N8W4 532 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 MFSD2AQ8NA29 543 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 CASKIN2Q8WXE0 1202 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 CTNNBL1Q8WYA6 563 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-205ENST00000468143 FEM1CQ96JP0 617 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 CNTNAP3BQ96NU0 1288 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 ELF4Q99607 663 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-205ENST00000468143 CNTNAP3Q9BZ76 1288 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 TRIM5Q9C035 493 aa11.71□□□□□ -0.53
CDHR3-205ENST00000468143 NHEJ1Q9H9Q4 299 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms