RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 SLC6A4P31645 630 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 RPA3P35244 121 aaPredicted RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 MAGEA12P43365 314 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 PRKAA2P54646 552 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 CDK18Q07002 472 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 ITKQ08881 620 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 SLC10A7Q0GE19 358 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 THOC5Q13769 683 aaKnown RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 MPP2Q14168 576 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 CCDC153Q494R4 210 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 TEDDM1Q5T9Z0 273 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 ATG16L1Q676U5 607 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 RNF43Q68DV7 783 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 RETSATQ6NUM9 610 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 TMC8Q8IU68 726 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 DCAF4L2Q8NA75 395 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 NETO2Q8NC67 525 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 ARRDC2Q8TBH0 407 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 MGARPQ8TDB4 240 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 TCP10LQ8TDR4 215 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 OTUB2Q96DC9 234 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 MRRFQ96E11 262 aaKnown RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 SEC16BQ96JE7 1060 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 C2orf49Q9BVC5 232 aaPredicted RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 LRRC3Q9BY71 257 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 RNF38Q9H0F5 515 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 RHOJQ9H4E5 214 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 TRPC7Q9HCX4 862 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 SMYD2Q9NRG4 433 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 C20orf96Q9NUD7 363 aaPredicted RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 ZDHHC7Q9NXF8 308 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 CORO1CQ9ULV4 474 aaPredicted RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 ANKRD6Q9Y2G4 727 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 PLLPQ9Y342 182 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 CPQQ9Y646 472 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 C2orf78A6NCI8 922 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 H0Y626 953 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 PFDN6O15212 129 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 SNX3O60493 162 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 PMPCBO75439 489 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 TGDSO95455 350 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 MT-CYBP00156 380 aaPredicted RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 ATP5BP06576 529 aaKnown RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 CKMP06732 381 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 TAC1P20366 129 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 WEE1P30291 646 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 ALDH3A1P30838 453 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 CA8P35219 290 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 CD86P42081 329 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 ETV4P43268 484 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 CSNK1DP48730 415 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 KPNA2P52292 529 aaKnown RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 PLK1P53350 603 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 HNRNPH2P55795 449 aaKnown RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 RPL26P61254 145 aaKnown RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 MTM1Q13496 603 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 LRRC14Q15048 493 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 SLC1A5Q15758 541 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 CERCAMQ5T4B2 595 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 FYB2Q5VWT5 728 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 LRRC34Q8IZ02 419 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 SPATA22Q8NHS9 363 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 SPPL3Q8TCT6 385 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 BRSK1Q8TDC3 778 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 POF1BQ8WVV4 589 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 SERAC1Q96JX3 654 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 PRICKLE1Q96MT3 831 aaPredicted RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 TSNARE1Q96NA8 513 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 FCRL3Q96P31 734 aaPredicted RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 NUDCD1Q96RS6 583 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 SEMA3CQ99985 751 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 PAIP2Q9BPZ3 127 aaKnown RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 SIKE1Q9BRV8 207 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 ADGRE3Q9BY15 652 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 PITPNM3Q9BZ71 974 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 LMAN2LQ9H0V9 348 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 ATXN3LQ9H3M9 355 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 FAM96AQ9H5X1 160 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 TASP1Q9H6P5 420 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 ZNF334Q9HCZ1 680 aaPredicted RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 CHRAC1Q9NRG0 131 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 TREX1Q9NSU2 369 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 HACD3Q9P035 362 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 KIAA1522Q9P206 1035 aaPredicted RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 KLHL14Q9P2G3 628 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 TBC1D14Q9P2M4 693 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 RPL26L1Q9UNX3 145 aaKnown RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 ARL2BPQ9Y2Y0 163 aa10.31□□□□□ -0.76
MSH5-213ENST00000468136 USP15Q9Y4E8 981 aaPredicted RBP10.31□□□□□ -0.76
MSH5-213ENST00000468136 CHD5Q8TDI0 1954 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 A0A1W2PQ67 120 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 MROH6A6NGR9 719 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 F5H423 210 aaPredicted RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
MSH5-213ENST00000468136 INSIG1O15503 277 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 GREM1O60565 184 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 USP12O75317 370 aa10.3□□□□□ -0.76
MSH5-213ENST00000468136 H2AFYO75367 372 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms