RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ABCG4Q9H172 646 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 USP29Q9HBJ7 922 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 OR12D3Q9UGF7 316 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 IPO11Q9UI26 975 aaKnown RBP17.57■□□□□ 0.4
TRIM56-203ENST00000467847 TENM4Q6N022 2769 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 LY6G6EA0A0G2JKS1 128 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 SPTY2D1-AS1A0A0U1RR47 76 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 IGLON5A6NGN9 336 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 H3BM21 787 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 NEMP1O14524 444 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 FPGTO14772 594 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 CSF2P04141 144 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 NME1P15531 152 aaKnown RBP17.56■□□□□ 0.4
TRIM56-203ENST00000467847 ACVRL1P37023 503 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 RABIFP47224 123 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 PDE1CQ14123 709 aaPredicted RBP17.56■□□□□ 0.4
TRIM56-203ENST00000467847 CDO1Q16878 200 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 ARL13BQ3SXY8 428 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 RAB6CQ53S08 254 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 ZSCAN30Q86W11 494 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 FAM181AQ8N9Y4 354 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 LSM14AQ8ND56 463 aaKnown RBP17.56■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF548Q8NEK5 533 aaPredicted RBP17.56■□□□□ 0.4
TRIM56-203ENST00000467847 SLC20A1Q8WUM9 679 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 ISG20Q96AZ6 181 aaKnown RBP17.56■□□□□ 0.4
TRIM56-203ENST00000467847 RAB6CQ9H0N0 254 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 OSBPL2Q9H1P3 480 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 U3KQA8 63 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 MGAQ8IWI9 3026 aa17.56■□□□□ 0.4
TRIM56-203ENST00000467847 CXorf51AA0A1B0GTR3 108 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 C16orf96A6NNT2 1141 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 KRIT1O00522 736 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 TSPAN6O43657 245 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 CSO75390 466 aaKnown RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 CD160O95971 181 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 MPOP05164 745 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 SDC4P31431 198 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 GKP32189 559 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 ADRA1BP35368 520 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 MAPKAPK2P49137 400 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 GEMIN4P57678 1058 aaKnown RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 NRG1Q02297 640 aaPredicted RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 TLE3Q04726 772 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 POLD3Q15054 466 aaPredicted RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 C15orf59Q2T9L4 293 aaPredicted RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 CCDC14Q49A88 953 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF805Q5CZA5 627 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 TCP11X2Q5H9J9 407 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 MANEALQ5VSG8 457 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 ZCCHC8Q6NZY4 707 aaKnown RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF677Q86XU0 584 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 SPACA3Q8IXA5 215 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 PLPP6Q8IY26 295 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 MAPK15Q8TD08 544 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 RXFP2Q8WXD0 754 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 RAB7BQ96AH8 199 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 LENG8Q96PV6 779 aaPredicted RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 LGMNQ99538 433 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 C1QTNF2Q9BXJ5 285 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 SAMSN1Q9NSI8 373 aaKnown RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 NDFIP2Q9NV92 336 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 DNAI1Q9UI46 699 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 NOCTQ9UK39 431 aaKnown RBP17.55■□□□□ 0.4
TRIM56-203ENST00000467847 HPCAL4Q9UM19 191 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 ITM2BQ9Y287 266 aa17.55■□□□□ 0.4
TRIM56-203ENST00000467847 USP12O75317 370 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 GFPT2O94808 682 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 RHOQP17081 205 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 MMP8P22894 467 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 EEF1GP26641 437 aaKnown RBP17.54■□□□□ 0.4
TRIM56-203ENST00000467847 ABL2P42684 1182 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 PCBP4P57723 403 aaKnown RBP17.54■□□□□ 0.4
TRIM56-203ENST00000467847 GABREP78334 506 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 CDR2Q01850 454 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 LEKR1Q6ZMV7 388 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 GPR155Q7Z3F1 870 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 NLRP14Q86W24 1093 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 IFI44Q8TCB0 444 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 ARHGEF2Q92974 986 aaKnown RBP17.54■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF578Q96N58 590 aaPredicted RBP17.54■□□□□ 0.4
TRIM56-203ENST00000467847 KLF6Q99612 283 aaPredicted RBP17.54■□□□□ 0.4
TRIM56-203ENST00000467847 RETREG1Q9H6L5 497 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 TMEM248Q9NWD8 314 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 TAB2Q9NYJ8 693 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 NCKIPSDQ9NZQ3 722 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 KLF15Q9UIH9 416 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 GGT7Q9UJ14 662 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 CSNK1G3Q9Y6M4 447 aa17.54■□□□□ 0.4
TRIM56-203ENST00000467847 CAPN8A6NHC0 703 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 FAM72CH0Y354 149 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 J3QKU1 62 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 AQP9O43315 295 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 GSRP00390 522 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 CYP1A1P04798 512 aaPredicted RBP17.53■□□□□ 0.4
TRIM56-203ENST00000467847 JUNDP17535 347 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 SNRPD1P62314 119 aaKnown RBP17.53■□□□□ 0.4
TRIM56-203ENST00000467847 CXADRP78310 365 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 CDKN3Q16667 212 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 DEFB133Q30KQ1 61 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms