RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 HSPA9P38646 679 aaKnown RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 PTGER3P43115 390 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 CSNK1DP48730 415 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 NAP1L1P55209 391 aaKnown RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 RWDD2BP57060 319 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 RPL6Q02878 288 aaKnown RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 ZNF33AQ06730 810 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 PPIDQ08752 370 aaKnown RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 CNTN1Q12860 1018 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 TFDP2Q14188 446 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 LPAL2Q16609 132 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 MYLK3Q32MK0 819 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 BBS12Q6ZW61 710 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 LPCAT2Q7L5N7 544 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 RFX6Q8HWS3 928 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 TEX26Q8N6G2 289 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 TSEN2Q8NCE0 465 aaKnown RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 UBE2Q2Q8WVN8 375 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 ARRDC3Q96B67 414 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 FAM122AQ96E09 287 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 EXOC2Q96KP1 924 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 OSBPL1AQ9BXW6 950 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 HDAC8Q9BY41 377 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 ZDHHC6Q9H6R6 413 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 SGK2Q9HBY8 427 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 HECAQ9UBI9 543 aaPredicted RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 RAB23Q9ULC3 237 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 PCDHGA5Q9Y5G8 931 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 THADAQ6YHU6 1953 aa11.21□□□□□ -0.62
MSH5-212ENST00000467319 SHROOM3Q8TF72 1996 aa11.21□□□□□ -0.62
MSH5-212ENST00000467319 CEP192Q8TEP8 1941 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 BCLAF3A2AJT9 711 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 PLK4O00444 970 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 KPNA3O00505 521 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 KRIT1O00522 736 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 INSIG1O15503 277 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 SPINT1O43278 529 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PLRG1O43660 514 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 GFRA3O60609 400 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 CST8O60676 142 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 GJB3O75712 270 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 POP4O95707 220 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 SEMA4FO95754 770 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 CCNCP24863 283 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 HOXD12P35452 270 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 NR2C2P49116 596 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 DNA2P51530 1060 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 TAS2R38P59533 333 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 AP1S1P61966 158 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 DYNLT1P63172 113 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 IFI35P80217 286 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 NSUN2Q08J23 767 aaKnown RBP eCLIP11.2□□□□□ -0.62
MSH5-212ENST00000467319 SFSWAPQ12872 951 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 HNRNPDQ14103 355 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 PDK1Q15118 436 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 POM121L1PQ3SYA9 428 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 ARSIQ5FYB1 569 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PLA2G2CQ5R387 149 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 LYSMD4Q5XG99 296 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 TIGD7Q6NT04 549 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 NPNTQ6UXI9 565 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PARS2Q7L3T8 475 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 FAM124AQ86V42 546 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 TMEFF1Q8IYR6 380 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PGBD5Q8N414 524 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 HDDC3Q8N4P3 179 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 OR2T34Q8NGX1 318 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 RUBCNQ92622 972 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PPP1R16AQ96I34 528 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 NSMCE3Q96MG7 304 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 HSPA12BQ96MM6 686 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 ZNF830Q96NB3 372 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 TUBGCP5Q96RT8 1024 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 OMDQ99983 421 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 ORAI3Q9BRQ5 295 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 GPR174Q9BXC1 333 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 CPEB1Q9BZB8 566 aaKnown RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 BTBD1Q9H0C5 482 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 NEUROG2Q9H2A3 272 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 KDM4CQ9H3R0 1056 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 LZTFL1Q9NQ48 299 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 DKK3Q9UBP4 350 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 EVLQ9UI08 416 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 AMFRQ9UKV5 643 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PACSIN2Q9UNF0 486 aaPredicted RBP11.2□□□□□ -0.62
MSH5-212ENST00000467319 HEY1Q9Y5J3 304 aa11.2□□□□□ -0.62
MSH5-212ENST00000467319 PCDH15Q96QU1 1955 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 APOC4-APOC2K7ER74 178 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 MATN3O15232 486 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 MAP3K13O43283 966 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 LATO43561 262 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 LRP3O75074 770 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms