RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 DCP2Q8IU60 420 aaKnown RBP19.49■□□□□ 0.71
COL9A3-206ENST00000466532 PLPP6Q8IY26 295 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 RFFLQ8WZ73 363 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 CENPIQ92674 756 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-206ENST00000466532 BMFQ96LC9 184 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 PCDHB18PQ96TA0 734 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 SELENOOQ9BVL4 669 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 NRSN2Q9GZP1 204 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 MAGEH1Q9H213 219 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 ADAM22Q9P0K1 906 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 HPCAL4Q9UM19 191 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 NEU3Q9UQ49 428 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 CLCA2Q9UQC9 943 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 SIK3Q9Y2K2 1263 aa19.49■□□□□ 0.71
COL9A3-206ENST00000466532 AP1G1O43747 822 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 RAMP2O60895 175 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 RFC1P35251 1148 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-206ENST00000466532 COPB1P53618 953 aaKnown RBP19.48■□□□□ 0.71
COL9A3-206ENST00000466532 E2F1Q01094 437 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 INSM1Q01101 510 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-206ENST00000466532 POLD3Q15054 466 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-206ENST00000466532 SYCP1Q15431 976 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 ZNF542PQ5EBM4 170 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 KYAT3Q6YP21 454 aaKnown RBP19.48■□□□□ 0.71
COL9A3-206ENST00000466532 LEKR1Q6ZMV7 388 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 TMC6Q7Z403 805 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 IFT43Q96FT9 208 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 DNAJC28Q9NX36 388 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 BAHCC1Q9P281 2608 aa19.48■□□□□ 0.71
COL9A3-206ENST00000466532 POM121BA6NF01 834 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 C16orf96A6NNT2 1141 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 KRIT1O00522 736 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 RAD51BO15315 384 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 GSRP00390 522 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 CALB1P05937 261 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 GIMD1P0DJR0 217 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 ALPPL2P10696 532 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 GPD1P21695 349 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 ABL2P42684 1182 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 GSCP56915 257 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-206ENST00000466532 SNRPD1P62314 119 aaKnown RBP19.47■□□□□ 0.71
COL9A3-206ENST00000466532 RTP5Q14D33 572 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 CLEC16AQ2KHT3 1053 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 ZNF805Q5CZA5 627 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 CLEC17AQ6ZS10 378 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 ZSCAN30Q86W11 494 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 CACTIN-AS1Q8N1I8 211 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 NEK11Q8NG66 645 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 OR2AP1Q8NGE2 309 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 NTAN1Q96AB6 310 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 RAB7BQ96AH8 199 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 GPR27Q9NS67 375 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 SEPT11Q9NVA2 429 aaKnown RBP19.47■□□□□ 0.71
COL9A3-206ENST00000466532 NLGN3Q9NZ94 848 aa19.47■□□□□ 0.71
COL9A3-206ENST00000466532 NEMP2A6NFY4 417 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 NEMP1O14524 444 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 TSPAN6O43657 245 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 TLX3O43711 291 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-206ENST00000466532 KDELR3O43731 214 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 UGT2B4P06133 528 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 ABCG1P45844 678 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 HNRNPKP61978 463 aaKnown RBP eCLIP19.46■□□□□ 0.713e-7■■■■□ 23.6
COL9A3-206ENST00000466532 SGCGQ13326 291 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 SOWAHCQ53LP3 525 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-206ENST00000466532 WDR59Q6PJI9 974 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 RBM43Q6ZSC3 357 aaKnown RBP19.46■□□□□ 0.71
COL9A3-206ENST00000466532 SLFN11Q7Z7L1 901 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 ZNF354CQ86Y25 554 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 PHF13Q86YI8 300 aaPredicted RBP19.46■□□□□ 0.71
COL9A3-206ENST00000466532 DCBLD1Q8N8Z6 715 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 C3orf20Q8ND61 904 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 ANKRD20A12PQ8NF67 263 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 CRELD1Q96HD1 420 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 APOLD1Q96LR9 279 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 GGT7Q9UJ14 662 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 ITM2BQ9Y287 266 aa19.46■□□□□ 0.71
COL9A3-206ENST00000466532 LOC400499M0QZD8 3231 aa19.46■□□□□ 0.7
COL9A3-206ENST00000466532 COL27A1Q8IZC6 1860 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-206ENST00000466532 IGLON5A6NGN9 336 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 FPGTO14772 594 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 POP4O95707 220 aaKnown RBP19.45■□□□□ 0.7
COL9A3-206ENST00000466532 CKMT1AP12532 417 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 RABIFP47224 123 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 FZD2Q14332 565 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 KDM7AQ6ZMT4 941 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 PARGQ86W56 976 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 PYROXD2Q8N2H3 581 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 KLHL32Q96NJ5 620 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 LENG8Q96PV6 779 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-206ENST00000466532 KLF6Q99612 283 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-206ENST00000466532 C1QTNF2Q9BXJ5 285 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 OSBPL1AQ9BXW6 950 aa19.45■□□□□ 0.7
COL9A3-206ENST00000466532 LIMA1Q9UHB6 759 aaKnown RBP19.45■□□□□ 0.7
COL9A3-206ENST00000466532 IPO11Q9UI26 975 aaKnown RBP19.45■□□□□ 0.7
COL9A3-206ENST00000466532 SPTY2D1-AS1A0A0U1RR47 76 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 ZSCAN5CA6NGD5 496 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-206ENST00000466532 SIGLEC16A6NMB1 481 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 LGALS16A8MUM7 142 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 H3BM21 787 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 SCAMP1O15126 338 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms