RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 LIX1LQ8IVB5 337 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 BBS7Q8IWZ6 715 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 CCDC185Q8N715 623 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 C4orf32Q8N8J7 132 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 ZNF680Q8NEM1 530 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 IL17RDQ8NFM7 739 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 OLIG1Q8TAK6 271 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 SMG7Q92540 1137 aaKnown RBP9.59□□□□□ -0.87
CDHR3-203ENST00000466045 GTF2H4Q92759 462 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 DHRS4Q9BTZ2 278 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 C9orf16Q9BUW7 83 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDHR3-203ENST00000466045 BRD9Q9H8M2 597 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 JMJD4Q9H9V9 463 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 OSGEPQ9NPF4 335 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 SLC35C2Q9NQQ7 365 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 DUS2Q9NX74 493 aaKnown RBP9.59□□□□□ -0.87
CDHR3-203ENST00000466045 TMEM216Q9P0N5 145 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 ZNF219Q9P2Y4 722 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-203ENST00000466045 TINAGQ9UJW2 476 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 MAN2B2Q9Y2E5 1009 aa9.59□□□□□ -0.87
CDHR3-203ENST00000466045 A0A0B4J269 797 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 LINC00862A6NCI5 91 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 GATCO43716 136 aaKnown RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 UPK1BO75841 260 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SEMA3DO95025 777 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 CALB1P05937 261 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SLC2A3P11169 496 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 BMP4P12644 408 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 IL12AP29459 219 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 EIF2DP41214 584 aaKnown RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 HTR3AP46098 478 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 PTPN5P54829 565 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ARID5AQ03989 594 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 TUBB3Q13509 450 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 GRAPQ13588 217 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SLC12A1Q13621 1099 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SEMA3AQ14563 771 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 PPP2R5DQ14738 602 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 GRM4Q14833 912 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 PON2Q15165 354 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ATF7IP2Q5U623 682 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SLC9A4Q6AI14 798 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 XKRXQ6PP77 449 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 KCTD8Q6ZWB6 473 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 HID1Q8IV36 788 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZFPM1Q8IX07 1006 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZCCHC9Q8N567 271 aaKnown RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 C2orf69Q8N8R5 385 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 MFSD2AQ8NA29 543 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 OR8K3Q8NH51 312 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 GRAPLQ8TC17 118 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 PHOSPHO2Q8TCD6 241 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZFP90Q8TF47 636 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 KLHL6Q8WZ60 621 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 DHX38Q92620 1227 aaKnown RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 CMTM5Q96DZ9 223 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 B3GALT6Q96L58 329 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 C9orf72Q96LT7 481 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 CSF3RQ99062 836 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SLC17A7Q9P2U7 560 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 PTPN22Q9Y2R2 807 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 COL4A3BPQ9Y5P4 624 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SH3D21A4FU49 640 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SAGE2PA6NJ88 616 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 LACTBL1A8MY62 500 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 PLOD2O00469 737 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 GREM1O60565 184 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZNF780AO75290 641 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 FAM155BO75949 473 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SNAP29O95721 258 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 USP17L8P0C7I0 530 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 FCER1AP12319 257 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SELLP14151 372 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ATF2P15336 505 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZNF76P36508 570 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 MRPS22P82650 360 aaKnown RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 UBE3AQ05086 875 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 INCA1Q0VD86 236 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 UBAP2LQ14157 1087 aaKnown RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 RFTN1Q14699 578 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 VARS2Q5ST30 1063 aaKnown RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 IRAK1BP1Q5VVH5 260 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 TMEM65Q6PI78 240 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ARHGAP36Q6ZRI8 547 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 BBS12Q6ZW61 710 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 PLEKHM3Q6ZWE6 761 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZBTB46Q86UZ6 589 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 RASGRP3Q8IV61 690 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 SLC9A9Q8IVB4 645 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 NKAIN4Q8IVV8 208 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZNF565Q8N9K5 539 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 TP53I13Q8NBR0 393 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-203ENST00000466045 POMGNT1Q8WZA1 660 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 TESCQ96BS2 214 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 ZFYVE19Q96K21 471 aa9.58□□□□□ -0.88
CDHR3-203ENST00000466045 GLT1D1Q96MS3 346 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms