RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 GLRX5Q86SX6 157 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 ZNF354CQ86Y25 554 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 GATAD2AQ86YP4 633 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 RYBPQ8N488 228 aaPredicted RBP22.14■■□□□ 1.13
LIME1-203ENST00000465591 MFSD2AQ8NA29 543 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 TMEM145Q8NBT3 493 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 PPP1R16AQ96I34 528 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 LRRC19Q9H756 370 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 FZD3Q9NPG1 666 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 TOR4AQ9NXH8 423 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 PLXNB3Q9ULL4 1909 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 A0A087X0T9 212 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 FGF10O15520 208 aaPredicted RBP22.13■■□□□ 1.13
LIME1-203ENST00000465591 FAM228BP0C875 321 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 TCF4P15884 667 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 ABL2P42684 1182 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 TMEM259Q4ZIN3 620 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 NEK5Q6P3R8 708 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 RAB44Q7Z6P3 723 aaPredicted RBP22.13■■□□□ 1.13
LIME1-203ENST00000465591 SKA1Q96BD8 255 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 CELF6Q96J87 481 aaKnown RBP22.13■■□□□ 1.13
LIME1-203ENST00000465591 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.13■■□□□ 1.13
LIME1-203ENST00000465591 XPO4Q9C0E2 1151 aaKnown RBP22.13■■□□□ 1.13
LIME1-203ENST00000465591 CAAP1Q9H8G2 361 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 GDF3Q9NR23 364 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 FADS3Q9Y5Q0 445 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 SCINQ9Y6U3 715 aa22.13■■□□□ 1.13
LIME1-203ENST00000465591 ZSCAN5CA6NGD5 496 aaPredicted RBP22.12■■□□□ 1.13
LIME1-203ENST00000465591 C1QTNF9BB2RNN3 333 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 PRAMEF26H0Y7S4 382 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 EEF2KO00418 725 aaKnown RBP22.12■■□□□ 1.13
LIME1-203ENST00000465591 KRIT1O00522 736 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 SPINT1O43278 529 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 RNF8O76064 485 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 PCDH8O95206 1070 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 SERPING1P05155 500 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 ATXN1LP0C7T5 689 aaKnown RBP22.12■■□□□ 1.13
LIME1-203ENST00000465591 C1QTNF9P0C862 333 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 MYBL1P10243 752 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 DESP17661 470 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 IL1R2P27930 398 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 NUDT1P36639 197 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 SNRPD1P62314 119 aaKnown RBP22.12■■□□□ 1.13
LIME1-203ENST00000465591 FGL2Q14314 439 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 SUZ12Q15022 739 aaKnown RBP22.12■■□□□ 1.13
LIME1-203ENST00000465591 CYTH1Q15438 398 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 MYLK3Q32MK0 819 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 PARP15Q460N3 678 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 TRIM11Q96F44 468 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 THAP2Q9H0W7 228 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 PDFQ9HBH1 243 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 LHX3Q9UBR4 397 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 GGT7Q9UJ14 662 aa22.12■■□□□ 1.13
LIME1-203ENST00000465591 GOLGA4Q13439 2230 aaKnown RBP22.11■■□□□ 1.13
LIME1-203ENST00000465591 C16orf96A6NNT2 1141 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 J3KR12 359 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 INSIG1O15503 277 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 PRPSAP2O60256 369 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 DFNA5O60443 496 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 UGT2B4P06133 528 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 CASP14P31944 242 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 HTR7P34969 479 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 GRK6P43250 576 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 CCDC15Q0P6D6 951 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 STAT4Q14765 748 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 SLC45A4Q5BKX6 768 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 FBXL19Q6PCT2 694 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 RFX8Q6ZV50 586 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 IQCHQ86VS3 1027 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 NPWQ8N729 165 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 SAP25Q8TEE9 199 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 BTBD6Q96KE9 485 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 KLHL32Q96NJ5 620 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 SLC39A8Q9C0K1 460 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 ITM2BQ9Y287 266 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 LUC7L2Q9Y383 392 aaKnown RBP22.11■■□□□ 1.13
LIME1-203ENST00000465591 BZW2Q9Y6E2 419 aaKnown RBP22.11■■□□□ 1.13
LIME1-203ENST00000465591 ANKRD36A6QL64 1941 aa22.11■■□□□ 1.13
LIME1-203ENST00000465591 POP4O95707 220 aaKnown RBP22.1■■□□□ 1.13
LIME1-203ENST00000465591 ERCC2P18074 760 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 EPHA8P29322 1005 aaPredicted RBP22.1■■□□□ 1.13
LIME1-203ENST00000465591 CLDN2P57739 230 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 RHOAP61586 193 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 BNIP3Q12983 259 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 LRRK1Q38SD2 2015 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 INO80DQ53TQ3 878 aaPredicted RBP22.1■■□□□ 1.13
LIME1-203ENST00000465591 ZNF805Q5CZA5 627 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 PPP6R3Q5H9R7 873 aaPredicted RBP22.1■■□□□ 1.13
LIME1-203ENST00000465591 TXNRD3NBQ6F5E7 133 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 GCNT7Q6ZNI0 430 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 ARHGAP12Q8IWW6 846 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 ADAMTS14Q8WXS8 1223 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 GATA6Q92908 595 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 ARHGEF26Q96DR7 871 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 LRIG1Q96JA1 1093 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 EXOC2Q96KP1 924 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 GDAP1L1Q96MZ0 367 aa22.1■■□□□ 1.13
LIME1-203ENST00000465591 MRPL47Q9HD33 250 aaKnown RBP22.1■■□□□ 1.13
LIME1-203ENST00000465591 CWC15Q9P013 229 aaKnown RBP22.1■■□□□ 1.13
LIME1-203ENST00000465591 NENFQ9UMX5 172 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms