RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SLC39A8Q9C0K1 460 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 EBF3Q9H4W6 596 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 TMLHEQ9NVH6 421 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 DLX3O60479 287 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 PEX2P28328 305 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 HTR7P34969 479 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 SLC1A2P43004 574 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 KPNA2P52292 529 aaKnown RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 SEPT6Q14141 434 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 MAPRE1Q15691 268 aaKnown RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 CNGA3Q16281 694 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 PDCD2Q16342 344 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 GNASQ5JWF2 1037 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 ZNF470Q6ECI4 717 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 BEND5Q7L4P6 421 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 KBTBD6Q86V97 674 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 CEP97Q8IW35 865 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 CCDC117Q8IWD4 279 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 SPATA6LQ8N4H0 392 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 ZNF419Q96HQ0 510 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 DDX50Q9BQ39 737 aaKnown RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 MRPL46Q9H2W6 279 aaKnown RBP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 RBM22Q9NW64 420 aaKnown RBP eCLIP18.55■□□□□ 0.56
SYNE4-204ENST00000465425 NCKIPSDQ9NZQ3 722 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 STK39Q9UEW8 545 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 SFMBT1Q9UHJ3 866 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 DSEQ9UL01 958 aa18.55■□□□□ 0.56
SYNE4-204ENST00000465425 MSI1O43347 362 aaKnown RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 GRID2O43424 1007 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 RGS2P41220 211 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 ARCN1P48444 511 aaKnown RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 IRX1P78414 480 aaPredicted RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 XIAPP98170 497 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 MED21Q13503 144 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 HNRNPDQ14103 355 aaKnown RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 DENND5AQ6IQ26 1287 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 DSELQ8IZU8 1212 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 CATSPER2Q96P56 530 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 GBP5Q96PP8 586 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 UNKQ9C0B0 810 aaKnown RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 SENP6Q9GZR1 1112 aaPredicted RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 ATXN3LQ9H3M9 355 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 ZDHHC7Q9NXF8 308 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 SLC2A6Q9UGQ3 507 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 TARM1B6A8C7 271 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 MOCS2O96007 188 aaPredicted RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 CHRNA1P02708 482 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 CYP11A1P05108 521 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 HLA-DQB2P05538 268 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 AKR1A1P14550 325 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 ARNTP27540 789 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 ADSLP30566 484 aaPredicted RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 CD151P48509 253 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 TSPY1Q01534 308 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 OVOS1Q6IE37 1185 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 THEM5Q8N1Q8 247 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 PDCD6IPQ8WUM4 868 aaKnown RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 TRAPPC9Q96Q05 1148 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 TMEM209Q96SK2 561 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 OMDQ99983 421 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 CCDC28BQ9BUN5 200 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 TRPV6Q9H1D0 765 aa18.54■□□□□ 0.56
SYNE4-204ENST00000465425 MRM3Q9HC36 420 aaKnown RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
SYNE4-204ENST00000465425 MYADML2A6NDP7 307 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 CELF2O95319 508 aaKnown RBP18.53■□□□□ 0.56
SYNE4-204ENST00000465425 PGK1P00558 417 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 HOXC13P31276 330 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 SLC5A3P53794 718 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 EIF4EBP2Q13542 120 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-204ENST00000465425 SFT2D3Q587I9 215 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 GDF6Q6KF10 455 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-204ENST00000465425 BNC2Q6ZN30 1099 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-204ENST00000465425 LRRTM3Q86VH5 581 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 CPSF7Q8N684 471 aaKnown RBP18.53■□□□□ 0.56
SYNE4-204ENST00000465425 OR10T2Q8NGX3 314 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 IFT43Q96FT9 208 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 TUBGCP5Q96RT8 1024 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 MTG1Q9BT17 334 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-204ENST00000465425 SPATS2LQ9NUQ6 558 aaKnown RBP18.53■□□□□ 0.56
SYNE4-204ENST00000465425 NDFIP2Q9NV92 336 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 PACSIN3Q9UKS6 424 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 BPTFQ12830 3046 aa18.53■□□□□ 0.56
SYNE4-204ENST00000465425 A0A087X1B8 175 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 ADRA1AP35348 466 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 GRIK1P39086 918 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 AQP4P55087 323 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 GRAMD1BQ3KR37 738 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 TMEM198Q66K66 360 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 CXCL17Q6UXB2 119 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 SPATA2LQ8IUW3 424 aaPredicted RBP18.52■□□□□ 0.56
SYNE4-204ENST00000465425 MFSD6LQ8IWD5 586 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 C2CD4AQ8NCU7 369 aaPredicted RBP18.52■□□□□ 0.56
SYNE4-204ENST00000465425 MRPL57Q9BQC6 102 aaKnown RBP18.52■□□□□ 0.56
SYNE4-204ENST00000465425 PRKD2Q9BZL6 878 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 SMOC2Q9H3U7 446 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 INPP5FQ9Y2H2 1132 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 SCN4AP35499 1836 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 MAP3K13O43283 966 aa18.52■□□□□ 0.56
SYNE4-204ENST00000465425 KPNA6O60684 536 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms