RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ARHGEF2Q92974 986 aaKnown RBP23.17■■□□□ 1.3
USP42-205ENST00000465073 TM6SF2Q9BZW4 377 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 IPO11Q9UI26 975 aaKnown RBP23.17■■□□□ 1.3
USP42-205ENST00000465073 RAI2Q9Y5P3 530 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 ACTL7AQ9Y615 435 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 CSNK1G3Q9Y6M4 447 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 TRPM6Q9BX84 2022 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 IGLON5A6NGN9 336 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 C16orf96A6NNT2 1141 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 H3BM21 787 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 FPGTO14772 594 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 CYP1A1P04798 512 aaPredicted RBP23.16■■□□□ 1.3
USP42-205ENST00000465073 NME1P15531 152 aaKnown RBP23.16■■□□□ 1.3
USP42-205ENST00000465073 POLD3Q15054 466 aaPredicted RBP23.16■■□□□ 1.3
USP42-205ENST00000465073 CDO1Q16878 200 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 CCDC14Q49A88 953 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 ZNF805Q5CZA5 627 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 NLRP14Q86W24 1093 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 PARGQ86W56 976 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 RYBPQ8N488 228 aaPredicted RBP23.16■■□□□ 1.3
USP42-205ENST00000465073 SLC20A1Q8WUM9 679 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 DEPDC7Q96QD5 511 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 KLF6Q99612 283 aaPredicted RBP23.16■■□□□ 1.3
USP42-205ENST00000465073 ABCG4Q9H172 646 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 MAGEH1Q9H213 219 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 CAAP1Q9H8G2 361 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 TMEM248Q9NWD8 314 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 CHMP5Q9NZZ3 219 aa23.16■■□□□ 1.3
USP42-205ENST00000465073 TK2O00142 265 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 NEMP1O14524 444 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 GFPT2O94808 682 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 POP4O95707 220 aaKnown RBP23.15■■□□□ 1.3
USP42-205ENST00000465073 C15orf59Q2T9L4 293 aaPredicted RBP23.15■■□□□ 1.3
USP42-205ENST00000465073 RAB6CQ53S08 254 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 STRADAQ7RTN6 431 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 ZNF548Q8NEK5 533 aaPredicted RBP23.15■■□□□ 1.3
USP42-205ENST00000465073 RAB6CQ9H0N0 254 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 GANQ9H2C0 597 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 NDFIP2Q9NV92 336 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 TAB2Q9NYJ8 693 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 NCKIPSDQ9NZQ3 722 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 DNAI1Q9UI46 699 aa23.15■■□□□ 1.3
USP42-205ENST00000465073 PTPRQQ9UMZ3 2332 aa23.14■■□□□ 1.3
USP42-205ENST00000465073 LY6G6EA0A0G2JKS1 128 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 C2CD4BA6NLJ0 364 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 RIOK3O14730 519 aaKnown RBP23.14■■□□□ 1.29
USP42-205ENST00000465073 NEBLO76041 1014 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 GSRP00390 522 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 PLEKP08567 350 aaPredicted RBP23.14■■□□□ 1.29
USP42-205ENST00000465073 PTPN9P43378 593 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 SNRPD1P62314 119 aaKnown RBP23.14■■□□□ 1.29
USP42-205ENST00000465073 ZCCHC8Q6NZY4 707 aaKnown RBP23.14■■□□□ 1.29
USP42-205ENST00000465073 TRIM72Q6ZMU5 477 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 LSMEM2Q8N112 164 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 DENND6BQ8NEG7 585 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 OR2AP1Q8NGE2 309 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 OR6K2Q8NGY2 324 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 CENPIQ92674 756 aaPredicted RBP23.14■■□□□ 1.29
USP42-205ENST00000465073 ARHGEF26Q96DR7 871 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 OSBPL1AQ9BXW6 950 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 NUP62CLQ9H1M0 184 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 PCDHB1Q9Y5F3 818 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 U3KQA8 63 aa23.14■■□□□ 1.29
USP42-205ENST00000465073 FAM72CH0Y354 149 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 KRIT1O00522 736 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 RAMP2O60895 175 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 MYF5P13349 255 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 CHRNB2P17787 502 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 GKP32189 559 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 ABL2P42684 1182 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 FMO1Q01740 532 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 PDE1CQ14123 709 aaPredicted RBP23.13■■□□□ 1.29
USP42-205ENST00000465073 MYLK3Q32MK0 819 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 FAM72AQ5TYM5 149 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 FAM72DQ6L9T8 149 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 FAM72BQ86X60 149 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 SLC30A5Q8TAD4 765 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 GPT2Q8TD30 523 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 TBC1D31Q96DN5 1066 aa23.13■■□□□ 1.29
USP42-205ENST00000465073 ZNF578Q96N58 590 aaPredicted RBP23.13■■□□□ 1.29
USP42-205ENST00000465073 FCRL3Q96P31 734 aaPredicted RBP23.13■■□□□ 1.29
USP42-205ENST00000465073 TDRD6O60522 2096 aaKnown RBP23.13■■□□□ 1.29
USP42-205ENST00000465073 LRIG2O94898 1065 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 SOX5P35711 763 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 PFN3P60673 137 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 POLR2FP61218 127 aaKnown RBP23.12■■□□□ 1.29
USP42-205ENST00000465073 TLE3Q04726 772 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 CCDC173Q0VFZ6 552 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 PHLDB2Q86SQ0 1253 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 LSM14AQ8ND56 463 aaKnown RBP23.12■■□□□ 1.29
USP42-205ENST00000465073 JOSD2Q8TAC2 188 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 IFI44Q8TCB0 444 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 MAPK15Q8TD08 544 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 C11orf70Q9BRQ4 267 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 NEU3Q9UQ49 428 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 DAAM1Q9Y4D1 1078 aa23.12■■□□□ 1.29
USP42-205ENST00000465073 SMG1Q96Q15 3661 aaKnown RBP23.12■■□□□ 1.29
USP42-205ENST00000465073 ZSCAN5CA6NGD5 496 aaPredicted RBP23.11■■□□□ 1.29
USP42-205ENST00000465073 ATXN7O15265 892 aaPredicted RBP23.11■■□□□ 1.29
USP42-205ENST00000465073 AQP9O43315 295 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms