RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC10A7Q0GE19 358 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 GALNT2Q10471 571 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 SLC9A4Q6AI14 798 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 NCEH1Q6PIU2 408 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 PRR23CQ6ZRP0 262 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 PLD5Q8N7P1 536 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 TSEN2Q8NCE0 465 aaKnown RBP17.96■□□□□ 0.47
VPS52-214ENST00000463486 GANCQ8TET4 914 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 LRIG1Q96JA1 1093 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 ZNF599Q96NL3 588 aa17.96■□□□□ 0.47
VPS52-214ENST00000463486 LRRD1A4D1F6 860 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 GDF9O60383 454 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 ITGB7P26010 798 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 CSNK1DP48730 415 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 RHOAP61586 193 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 GBE1Q04446 702 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 KIAA0895LQ68EN5 471 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 SLC23A3Q6PIS1 610 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 MFSD7Q6UXD7 560 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 OR2T34Q8NGX1 318 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 OR14C36Q8NHC7 312 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 EXOC2Q96KP1 924 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 GDAP1L1Q96MZ0 367 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 PSKH2Q96QS6 385 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 CPEB1Q9BZB8 566 aaKnown RBP17.95■□□□□ 0.46
VPS52-214ENST00000463486 KDM4CQ9H3R0 1056 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 CAPN10Q9HC96 672 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 TRIM10Q9UDY6 481 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 EVLQ9UI08 416 aaPredicted RBP17.95■□□□□ 0.46
VPS52-214ENST00000463486 ADGRG1Q9Y653 693 aa17.95■□□□□ 0.46
VPS52-214ENST00000463486 KRIT1O00522 736 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 SPINT1O43278 529 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 LATO43561 262 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 PSTPIP1O43586 416 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 SPOPO43791 374 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 GJB3O75712 270 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 IPO7O95373 1038 aaKnown RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 SERPINB6P35237 376 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 CDKN2BP42772 138 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 CCR5P51681 352 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 PPP2CBP62714 309 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 PPP2CAP67775 309 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 IRX4P78413 519 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 NSUN2Q08J23 767 aaKnown RBP eCLIP17.94■□□□□ 0.46
VPS52-214ENST00000463486 RFTN1Q14699 578 aaPredicted RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 WDR45BQ5MNZ6 344 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 SYCP2LQ5T4T6 812 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 ERN2Q76MJ5 926 aaKnown RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 PARS2Q7L3T8 475 aaKnown RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 LRRC49Q8IUZ0 686 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 LRRC8AQ8IWT6 810 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 KATNAL2Q8IYT4 538 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 PGBD5Q8N414 524 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 KRT35Q92764 455 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 RNF25Q96BH1 459 aaPredicted RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 CALR3Q96L12 384 aaKnown RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 TSGA13Q96PP4 275 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 ZDHHC6Q9H6R6 413 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 DDX56Q9NY93 547 aaKnown RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 DTLQ9NZJ0 730 aa17.94■□□□□ 0.46
VPS52-214ENST00000463486 EIF2B4Q9UI10 523 aaKnown RBP17.94■□□□□ 0.46
VPS52-214ENST00000463486 LNP1A1A4G5 178 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 GRID2IPA4D2P6 1211 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 GOLGA6L3A6NEY3 463 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 LRRC72A6NJI9 287 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 C16orf96A6NNT2 1141 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 PALMO75781 387 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 MAP3K6O95382 1288 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 KRT1P04264 644 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 TNNT1P13805 278 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 GARSP41250 739 aaKnown RBP17.93■□□□□ 0.46
VPS52-214ENST00000463486 DPP6P42658 865 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 PEX5P50542 639 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 CCZ1BP86790 482 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 CCZ1P86791 482 aaPredicted RBP17.93■□□□□ 0.46
VPS52-214ENST00000463486 ADCY2Q08462 1091 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 LBRQ14739 615 aaKnown RBP17.93■□□□□ 0.46
VPS52-214ENST00000463486 ZNF805Q5CZA5 627 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 TMCO4Q5TGY1 634 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 DAAM2Q86T65 1068 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 TEX26Q8N6G2 289 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 FATE1Q969F0 183 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 SP110Q9HB58 689 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 PCDH15Q96QU1 1955 aa17.93■□□□□ 0.46
VPS52-214ENST00000463486 FAM47DPA6NHR8 397 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 MEI4A8MW99 385 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 GOLGA6L6A8MZA4 724 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 WNT9AO14904 365 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 KHNYNO15037 678 aaKnown RBP17.92■□□□□ 0.46
VPS52-214ENST00000463486 FOXD2O60548 495 aaPredicted RBP17.92■□□□□ 0.46
VPS52-214ENST00000463486 FSBPO95073 299 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 IGSF6O95976 241 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 UGT2B4P06133 528 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 SERPINF2P08697 491 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 CR2P20023 1033 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 CD27P26842 260 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 BNC1Q01954 994 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 DUOXA1Q1HG43 343 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 TRIM61Q5EBN2 209 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 GDPD4Q6W3E5 623 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms