RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 GPIP06744 558 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 CDK9P50750 372 aaKnown RBP15.97■□□□□ 0.15
SMC4-204ENST00000462787 TYW3Q6IPR3 259 aaKnown RBP15.97■□□□□ 0.15
SMC4-204ENST00000462787 ADGRF2Q8IZF7 708 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 DEFB106AQ8N104 65 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 SUN5Q8TC36 379 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 HTRA1Q92743 480 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 PANX3Q96QZ0 392 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 HGH1Q9BTY7 390 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 ALG9Q9H6U8 611 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 CARD8Q9Y2G2 431 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 MYL12BO14950 172 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 RGS14O43566 566 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 DGKKQ5KSL6 1271 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 ILDR2Q71H61 639 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 NT5DC4Q86YG4 428 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 WDR18Q9BV38 432 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 NT5MQ9NPB1 228 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 VAV3Q9UKW4 847 aa15.97■□□□□ 0.15
SMC4-204ENST00000462787 DDTLA6NHG4 134 aaPredicted RBP15.96■□□□□ 0.15
SMC4-204ENST00000462787 C2P06681 752 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 DLG1Q12959 904 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 CDCA2Q69YH5 1023 aaPredicted RBP15.96■□□□□ 0.15
SMC4-204ENST00000462787 CASP12Q6UXS9 341 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 TMEM216Q9P0N5 145 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 HGFP14210 728 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 TKTL1P51854 596 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 CNTN1Q12860 1018 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 PLCL1Q15111 1095 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 VWA5B1Q5TIE3 1220 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 KCTD8Q6ZWB6 473 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 TBCDQ9BTW9 1192 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 CHRNB2P17787 502 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 RENBPP51606 427 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 PRKG2Q13237 762 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 PTGR2Q8N8N7 351 aaPredicted RBP15.96■□□□□ 0.15
SMC4-204ENST00000462787 STAG3L4Q8TBR4 150 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 CLPBQ9H078 707 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 PCDHB8Q9UN66 801 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 PCDHGC3Q9UN70 934 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 TAL1P17542 331 aaPredicted RBP15.96■□□□□ 0.15
SMC4-204ENST00000462787 CCR1P32246 355 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 CELF6Q96J87 481 aaKnown RBP15.96■□□□□ 0.15
SMC4-204ENST00000462787 OMDQ99983 421 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 ACTR8Q9H981 624 aa15.96■□□□□ 0.15
SMC4-204ENST00000462787 PABPC4LP0CB38 370 aaKnown RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 S100A3P33764 101 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 SLC26A2P50443 739 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 RAB25P57735 213 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 MARC1Q5VT66 337 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 DNAJC14Q6Y2X3 702 aaPredicted RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 FAM183BPQ6ZVS7 135 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 SMIM5Q71RC9 77 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 NECAB2Q7Z6G3 386 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 RHOJQ9H4E5 214 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 PTPRHQ9HD43 1115 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CD320Q9NPF0 282 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 POLLQ9UGP5 575 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CNTNAP2Q9UHC6 1331 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 ABCC6O95255 1503 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 G3V2T6 193 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 ACKR2O00590 384 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CCNE2O96020 404 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 HMBSP08397 361 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CHRM1P11229 460 aaPredicted RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 RALGDSQ12967 914 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 DEPDC4Q8N2C3 294 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 SETD4Q9NVD3 440 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 RPS6KA6Q9UK32 745 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 BCLAF3A2AJT9 711 aaKnown RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 TTLL13PA6NNM8 815 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 H3BSA7 217 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 SEC22BO75396 215 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 AOC1P19801 751 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CAPGP40121 348 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CLCN3P51790 818 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 HIST2H2ACQ16777 129 aaPredicted RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 HIST2H2AA3Q6FI13 130 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 MILR1Q7Z6M3 343 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 DCP1BQ8IZD4 617 aaKnown RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 SMYD1Q8NB12 490 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 LHX5Q9H2C1 402 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 DGKBQ9Y6T7 804 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 ERBB2P04626 1255 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 HNRNPLP14866 589 aaKnown RBP eCLIP15.95■□□□□ 0.142e-15■■■■■ 47.4
SMC4-204ENST00000462787 CPB1P15086 417 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 GNAZP19086 355 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 TFEBP19484 476 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CHI3L1P36222 383 aaPredicted RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 ZNF410Q86VK4 478 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 SPPL2CQ8IUH8 684 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 CYP4Z2PQ8N1L4 340 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 FAM45AQ8TCE6 357 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 C7orf43Q8WVR3 580 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 YTHDF1Q9BYJ9 559 aaKnown RBP15.95■□□□□ 0.14
SMC4-204ENST00000462787 DSEQ9UL01 958 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 GSTK1Q9Y2Q3 226 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 TRAF6Q9Y4K3 522 aa15.95■□□□□ 0.14
SMC4-204ENST00000462787 A0A0J9YYE9 177 aa15.94■□□□□ 0.14
SMC4-204ENST00000462787 PAPSS1O43252 624 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms