RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 LEKR1Q6ZMV7 388 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 PARGQ86W56 976 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 FAM72BQ86X60 149 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 RYBPQ8N488 228 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-204ENST00000462475 JOSD2Q8TAC2 188 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 FAM174AQ8TBP5 190 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 RXFP2Q8WXD0 754 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 FEM1CQ96JP0 617 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 FCRL3Q96P31 734 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-204ENST00000462475 KLF6Q99612 283 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-204ENST00000462475 C11orf70Q9BRQ4 267 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 OR12D3Q9UGF7 316 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 DACH1Q9UI36 760 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 DNAI1Q9UI46 699 aa16.38■□□□□ 0.21
COL7A1-204ENST00000462475 DOCK4Q8N1I0 1966 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 SPTY2D1-AS1A0A0U1RR47 76 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 IGLON5A6NGN9 336 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 SPINT1O43278 529 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 CSF2P04141 144 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 PRB1P04280 392 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 RHOQP17081 205 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 CHRNB2P17787 502 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 MMP8P22894 467 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 EEF1GP26641 437 aaKnown RBP16.37■□□□□ 0.21
COL7A1-204ENST00000462475 SDC4P31431 198 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 ACTN2P35609 894 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 RABIFP47224 123 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 MAPKAPK2P49137 400 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 FMO1Q01740 532 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 NRG1Q02297 640 aaPredicted RBP16.37■□□□□ 0.21
COL7A1-204ENST00000462475 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 DCP2Q8IU60 420 aaKnown RBP16.37■□□□□ 0.21
COL7A1-204ENST00000462475 FAM181AQ8N9Y4 354 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 SLC30A5Q8TAD4 765 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 GPT2Q8TD30 523 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 ARHGEF2Q92974 986 aaKnown RBP16.37■□□□□ 0.21
COL7A1-204ENST00000462475 ISG20Q96AZ6 181 aaKnown RBP16.37■□□□□ 0.21
COL7A1-204ENST00000462475 C1QTNF2Q9BXJ5 285 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 KLF15Q9UIH9 416 aa16.37■□□□□ 0.21
COL7A1-204ENST00000462475 NEMP2A6NFY4 417 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 C2CD4BA6NLJ0 364 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 C16orf96A6NNT2 1141 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 KRIT1O00522 736 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 EPHB6O15197 1021 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 LRIG2O94898 1065 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 MPOP05164 745 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 GP1BAP07359 652 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 ETFBP38117 255 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 CDR2Q01850 454 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 TLE3Q04726 772 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 PDE1CQ14123 709 aaPredicted RBP16.36■□□□□ 0.21
COL7A1-204ENST00000462475 ARL13BQ3SXY8 428 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 ZNF805Q5CZA5 627 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 ZNF677Q86XU0 584 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 SPACA3Q8IXA5 215 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 CCDC185Q8N715 623 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 IFI44Q8TCB0 444 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 DEPDC7Q96QD5 511 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 DUSP23Q9BVJ7 150 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 OSBPL2Q9H1P3 480 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 TMEM248Q9NWD8 314 aa16.36■□□□□ 0.21
COL7A1-204ENST00000462475 TRPM6Q9BX84 2022 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 CXorf51AA0A1B0GTR3 108 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 H3BM21 787 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 FPGTO14772 594 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 TSPAN6O43657 245 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 RAMP2O60895 175 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 CSO75390 466 aaKnown RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 GSRP00390 522 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 UGT2B4P06133 528 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 PTPN9P43378 593 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 HDAC4P56524 1084 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 JAM2P57087 298 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 POLR2FP61218 127 aaKnown RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 GABREP78334 506 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 PTP4A2Q12974 167 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 EIF2B5Q13144 721 aaKnown RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 SGCGQ13326 291 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 LRRC73Q5JTD7 316 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 ATXN7L2Q5T6C5 722 aaPredicted RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 ZCCHC8Q6NZY4 707 aaKnown RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 ZSCAN30Q86W11 494 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 PLPP6Q8IY26 295 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 DENND6BQ8NEG7 585 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 OR2AP1Q8NGE2 309 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 RAB7BQ96AH8 199 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 TBC1D31Q96DN5 1066 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 LENG8Q96PV6 779 aaPredicted RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 MAGEH1Q9H213 219 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 VPS16Q9H269 839 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 USP29Q9HBJ7 922 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 FAM207AQ9NSI2 230 aaPredicted RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 IPO11Q9UI26 975 aaKnown RBP16.35■□□□□ 0.21
COL7A1-204ENST00000462475 MGAQ8IWI9 3026 aa16.35■□□□□ 0.21
COL7A1-204ENST00000462475 NEMP1O14524 444 aa16.34■□□□□ 0.21
COL7A1-204ENST00000462475 ATXN7O15265 892 aaPredicted RBP16.34■□□□□ 0.21
COL7A1-204ENST00000462475 AQP9O43315 295 aa16.34■□□□□ 0.21
COL7A1-204ENST00000462475 USP12O75317 370 aa16.34■□□□□ 0.21
COL7A1-204ENST00000462475 C1QL1O75973 258 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms