RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 PLPP6Q8IY26 295 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 PYROXD2Q8N2H3 581 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 EID2Q8N6I1 236 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 LRIG1Q96JA1 1093 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 VCPIP1Q96JH7 1222 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 GDAP1L1Q96MZ0 367 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 CALN1Q9BXU9 219 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 OSBPL1AQ9BXW6 950 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 TAS2R14Q9NYV8 317 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 FZD10Q9ULW2 581 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 A0A1W2PQC6 194 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 A6NNZ2 444 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 RNF103O00237 685 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 KRIT1O00522 736 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 ATMINO43313 823 aaPredicted RBP14.18□□□□□ -0.14
USP4-206ENST00000461553 BUB1O43683 1085 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 KDELR3O43731 214 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 AP1G1O43747 822 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 SDC3O75056 442 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 RFPL3O75679 317 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 TMCC1O94876 653 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 CD160O95971 181 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 IGSF6O95976 241 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 PSMA2P25787 234 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 TPM4P67936 248 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
USP4-206ENST00000461553 PARP15Q460N3 678 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 TMEM259Q4ZIN3 620 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 HS1BP3Q53T59 392 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 SFMBT2Q5VUG0 894 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 LEKR1Q6ZMV7 388 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 IRF2BP2Q7Z5L9 587 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 PTAR1Q7Z6K3 402 aaPredicted RBP14.18□□□□□ -0.14
USP4-206ENST00000461553 FAM174AQ8TBP5 190 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 CASKIN2Q8WXE0 1202 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 RAB7BQ96AH8 199 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 ARHGEF26Q96DR7 871 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 SYT11Q9BT88 431 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 MAGEB5Q9BZ81 275 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 PARVAQ9NVD7 372 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 DONSONQ9NYP3 566 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 ZFR2Q9UPR6 939 aaKnown RBP14.18□□□□□ -0.14
USP4-206ENST00000461553 PCDHGA1Q9Y5H4 931 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 FADS3Q9Y5Q0 445 aa14.18□□□□□ -0.14
USP4-206ENST00000461553 ZFYVE26Q68DK2 2539 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 DSPP15924 2871 aaKnown RBP14.17□□□□□ -0.14
USP4-206ENST00000461553 A0A1B0GTH6 734 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 NEMP1O14524 444 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 SERPINC1P01008 464 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 UGT2B4P06133 528 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 GKP32189 559 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 HTR7P34969 479 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 YBEYP58557 167 aaPredicted RBP14.17□□□□□ -0.14
USP4-206ENST00000461553 RHOAP61586 193 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 OGDHQ02218 1023 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 RAD51Q06609 339 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 BNIP3Q12983 259 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 ZNF805Q5CZA5 627 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 DHRS13Q6UX07 377 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 GCNT7Q6ZNI0 430 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 OR13H1Q8NG92 308 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 HMCESQ96FZ2 354 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 FEM1CQ96JP0 617 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 HAUS4Q9H6D7 363 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 AP4E1Q9UPM8 1137 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 LAMA5O15230 3695 aa14.17□□□□□ -0.14
USP4-206ENST00000461553 SRRM3A6NNA2 597 aaPredicted RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 WASH4PA8MWX3 477 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 EIF3CLB5ME19 914 aaKnown RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 RASA4BC9J798 803 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 RASA4O43374 803 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 TSPAN6O43657 245 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 POP4O95707 220 aaKnown RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 CDK4P11802 303 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 HNF1BP35680 557 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 PRKCIP41743 596 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 ABL2P42684 1182 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 ACADVLP49748 655 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 CLDN2P57739 230 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 KLHL30Q0D2K2 578 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 DNAJC3Q13217 504 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 MAMLD1Q13495 774 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 SMAD1Q15797 465 aaKnown RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 ATXN7L2Q5T6C5 722 aaPredicted RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 E4F1Q66K89 784 aaPredicted RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 PLEKHA7Q6IQ23 1121 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 KYAT3Q6YP21 454 aaKnown RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 ABI3BPQ7Z7G0 1075 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 PROSER1Q86XN7 944 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 ZNF653Q96CK0 615 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 TRIM11Q96F44 468 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 EIF3CQ99613 913 aaKnown RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 NCAPGQ9BPX3 1015 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 SLC17A9Q9BYT1 436 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 CCDC86Q9H6F5 360 aaKnown RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 NOL6Q9H6R4 1146 aaKnown RBP14.16□□□□□ -0.14
USP4-206ENST00000461553 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 SCINQ9Y6U3 715 aa14.16□□□□□ -0.14
USP4-206ENST00000461553 LRP4O75096 1905 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms