RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 RANBP10Q6VN20 620 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 LEKR1Q6ZMV7 388 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 UNC5AQ6ZN44 842 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 MARK2Q7KZI7 788 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 GALNT7Q86SF2 657 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 TMEM135Q86UB9 458 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 ANKMY2Q8IV38 441 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 TRIM42Q8IWZ5 723 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 SUGP1Q8IWZ8 645 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 CTAGE3PQ8IX95 158 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 YAF2Q8IY57 180 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 HS6ST3Q8IZP7 471 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 CFAP52Q8N1V2 620 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 CPA6Q8N4T0 437 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 PCDH20Q8N6Y1 951 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 PAF1Q8N7H5 531 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 CNTD1Q8N815 330 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 ZSCAN18Q8TBC5 510 aaPredicted RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 BPIFB1Q8TDL5 484 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 OSCP1Q8WVF1 389 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 DYDC1Q8WWB3 177 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 IRF7Q92985 503 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.56□□□□□ -1.2
LSG1-205ENST00000461343 CERS2Q96G23 380 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 CFAP36Q96G28 342 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 SIGLEC10Q96LC7 697 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 PRICKLE1Q96MT3 831 aaPredicted RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 CYP2S1Q96SQ9 504 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 PAFAH2Q99487 392 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 SEMA3CQ99985 751 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 BBS2Q9BXC9 721 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 CAPS2Q9BXY5 557 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 NSRP1Q9H0G5 558 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 EPB41L4BQ9H329 900 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 ATP13A3Q9H7F0 1226 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 PDFQ9HBH1 243 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 ABCB8Q9NUT2 735 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 DNAJC17Q9NVM6 304 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 MOCS1Q9NZB8 636 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.56□□□□□ -1.2
LSG1-205ENST00000461343 PRKAG3Q9UGI9 489 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 RABGEF1Q9UJ41 708 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 MID2Q9UJV3 735 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 NOVA2Q9UNW9 492 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 YBX2Q9Y2T7 364 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 MFHAS1Q9Y4C4 1052 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 MYO18AQ92614 2054 aaKnown RBP7.56□□□□□ -1.2
LSG1-205ENST00000461343 NUP205Q92621 2012 aa7.56□□□□□ -1.2
LSG1-205ENST00000461343 HELZP42694 1942 aaKnown RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 LOC285095A0A1B0GVY8 99 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 TCRBV7S3A2A0A539 114 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 FAM47DPA6NHR8 397 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 FAM159BA6NKW6 160 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 SMIM23A6NLE4 172 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 POC1B-GALNT4F8VUJ3 575 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 J3KR12 359 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 POLR3GO15318 223 aaPredicted RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 PRPF4O43172 522 aaKnown RBP eCLIP7.55□□□□□ -1.2
LSG1-205ENST00000461343 GREM1O60565 184 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 TSPAN3O60637 253 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 PMPCBO75439 489 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 PEX11BO96011 259 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 GSRP00390 522 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 SRPRAP08240 638 aaKnown RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 MYOGP15173 224 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 POLR2EP19388 210 aaKnown RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 MGAT1P26572 445 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 HOXD9P28356 352 aaPredicted RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 SERPINA4P29622 427 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 ADRA1AP35348 466 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 GP5P40197 560 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 EIF2DP41214 584 aaKnown RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 CD86P42081 329 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 CCT5P48643 541 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 SUOXP51687 545 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 EPHB1P54762 984 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 PTPN5P54829 565 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 IL9RQ01113 521 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 SLC10A7Q0GE19 358 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 CCDC15Q0P6D6 951 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 TMED2Q15363 201 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 SLC1A5Q15758 541 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 PLEKHG6Q3KR16 790 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 ANKRD20A4Q4UJ75 823 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 TNFAIP8L3Q5GJ75 292 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 ARMC12Q5T9G4 340 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 RNF187Q5TA31 235 aaPredicted RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 KIAA0930Q6ICG6 404 aaPredicted RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 MRNIPQ6NTE8 343 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 ANKRD54Q6NXT1 300 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 SDCCAG8Q86SQ7 713 aaPredicted RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 PRUNE1Q86TP1 453 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 RBM23Q86U06 439 aaKnown RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 RASSF3Q86WH2 238 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 ARID3BQ8IVW6 561 aaPredicted RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 BBS7Q8IWZ6 715 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 HOMEZQ8IX15 550 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 MPP5Q8N3R9 675 aa7.55□□□□□ -1.2
LSG1-205ENST00000461343 TAB3Q8N5C8 712 aaPredicted RBP7.55□□□□□ -1.2
LSG1-205ENST00000461343 SH2D3CQ8N5H7 860 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms