RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PPM1LQ5SGD2 360 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 AFTPHQ6ULP2 937 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 OLFML1Q6UWY5 402 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ELMO1Q92556 727 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 RERGQ96A58 199 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 DMGDHQ9UI17 866 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ACTL7BQ9Y614 415 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 SLC9A3R1O14745 358 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 KMOO15229 486 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CHADO15335 359 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 IFNA6P05013 189 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 FDPSP14324 419 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 TSHRP16473 764 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 RPA3P35244 121 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 MAPKAPK3Q16644 382 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 TTI2Q6NXR4 508 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 TCAIMQ8N3R3 496 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PIK3C3Q8NEB9 887 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ZSWIM2Q8NEG5 633 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CD101Q93033 1021 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ASB7Q9H672 318 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ARMCX1Q9P291 453 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 MRTO4Q9UKD2 239 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 DHRS7Q9Y394 339 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CFAP65Q6ZU64 1925 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 SPATA31E1Q6ZUB1 1445 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PRR36Q9H6K5 1346 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 H3BNH8 94 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 APOC4-APOC2K7ER74 178 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PLOD3O60568 738 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 SNX4O95219 450 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 APOC2P02655 101 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 FTH1P02794 183 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CXCL8P10145 99 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 GRIA3P42263 894 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 RPL21P46778 160 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 OLR1P78380 273 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 SPIBQ01892 262 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ST3GAL1Q11201 340 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 MYBPC3Q14896 1274 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 NOL9Q5SY16 702 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 ATCAYQ86WG3 371 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 DAW1Q8N136 415 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PCDH20Q8N6Y1 951 aaKnown RBP9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PYDC1Q8WXC3 89 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CXorf40BQ96DE9 158 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 GSDMCQ9BYG8 508 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 CKLFQ9UBR5 152 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PCDHGC5Q9Y5F6 944 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 PCDHA11Q9Y5I1 949 aa9.08□□□□□ -0.96
BRCA1-205ENST00000461221 A0A1W2PQ72 361 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TPP1O14773 563 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 AREL1O15033 823 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 AMHP03971 560 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 GLI1P08151 1106 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ATP5F1P24539 256 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 GSTT1P30711 240 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 MNDAP41218 407 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 CDK9P50750 372 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 RUNDC3AQ59EK9 446 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TRIM40Q6P9F5 258 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 METTL3Q86U44 580 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 OR10H5Q8NGA6 315 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 FAM129BQ96TA1 746 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TTLL2Q9BWV7 592 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 OSBPL11Q9BXB4 747 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TMEM39BQ9GZU3 492 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SEMA6BQ9H3T3 888 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 POPDC2Q9HBU9 364 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 OR10H3O60404 316 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 RPL5P46777 297 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PSME3P61289 254 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 GCNT1Q02742 428 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 RIPK1Q13546 671 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PDK3Q15120 406 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SPESP1Q6UW49 350 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 METTL7BQ6UX53 244 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ARHGAP36Q6ZRI8 547 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 NANOGNBQ7Z5D8 188 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 DNERQ8NFT8 737 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 RDH11Q8TC12 318 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SLC5A5Q92911 643 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 FDXACB1Q9BRP7 624 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 MTG1Q9BT17 334 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 CEP41Q9BYV8 373 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 AGO4Q9HCK5 861 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TUBA8Q9NY65 449 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 FBXL21Q9UKT6 434 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 UMODL1Q5DID0 1318 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 CRB1P82279 1406 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PDE2AO00408 941 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 CBX6O95503 412 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ATP4AP20648 1035 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SSTR1P30872 391 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ALDH5A1P51649 535 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 NEPROQ6NW34 567 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SLC27A1Q6PCB7 646 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms