RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 VPS39Q96JC1 886 aa15.61■□□□□ 0.09
LMNB1-203ENST00000460265 IPO11Q9UI26 975 aaKnown RBP15.61■□□□□ 0.09
LMNB1-203ENST00000460265 FYNP06241 537 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 DLDP09622 509 aaKnown RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CHN2P52757 468 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 ITGA7Q13683 1181 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 BTG3Q14201 252 aaPredicted RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 INTS6LQ5JSJ4 861 aaKnown RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 SPANXN3Q5MJ09 141 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 KLHL35Q6PF15 583 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 LDB1Q86U70 411 aaPredicted RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 SLC41A1Q8IVJ1 513 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 PLD6Q8N2A8 252 aaKnown RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 RNF148Q8N7C7 305 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 PYDC1Q8WXC3 89 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 FBXO32Q969P5 355 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CPNE1Q99829 537 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 DHRS4Q9BTZ2 278 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 NMRAL1Q9HBL8 299 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 SLC12A8A0AV02 714 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 ARHGAP10A1A4S6 786 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 MGEA5O60502 916 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 AP2A1O95782 977 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 UQCRBP14927 111 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 LRPAP1P30533 357 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 ETV4P43268 484 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CD97P48960 835 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CSHL1Q14406 222 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 TRMT5Q32P41 509 aaKnown RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 KYAT3Q6YP21 454 aaKnown RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CHSY1Q86X52 802 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 ZNF280BQ86YH2 543 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 OR10T2Q8NGX3 314 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 BLOC1S5Q8TDH9 187 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 MZB1Q8WU39 189 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 KCTD4Q8WVF5 259 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 FAM124BQ9H5Z6 455 aaPredicted RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 PTCH2Q9Y6C5 1203 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 MYO9BQ13459 2157 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 PLIN3O60664 434 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 SERPINE1P05121 402 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 TCN1P20061 433 aaPredicted RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CNTFP26441 200 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 DLG1Q12959 904 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 GRTP1Q5TC63 336 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 ESRP1Q6NXG1 681 aaKnown RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CIR1Q86X95 450 aaPredicted RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 CASP10Q92851 521 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 PTCD3Q96EY7 689 aaKnown RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 MARK4Q96L34 752 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 FTHL17Q9BXU8 183 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 TIMMDC1Q9NPL8 285 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 KCNK4Q9NYG8 393 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 RCOR3Q9P2K3 495 aaPredicted RBP15.6■□□□□ 0.09
LMNB1-203ENST00000460265 ANKRD12Q6UB98 2062 aa15.6■□□□□ 0.09
LMNB1-203ENST00000460265 TK2O00142 265 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 GPC4O75487 556 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TRPA1O75762 1119 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RPL9P32969 192 aaKnown RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TRIP10Q15642 601 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 MAPRE1Q15691 268 aaKnown RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 PSMD5Q16401 504 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RNF180Q86T96 592 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TREML1Q86YW5 311 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 GSTCDQ8NEC7 633 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RAB3IL1Q8TBN0 382 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 GAB3Q8WWW8 586 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 PHF21BQ96EK2 531 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 NUF2Q9BZD4 464 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 C20orf27Q9GZN8 174 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 CYLDQ9NQC7 956 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 DOLKQ9UPQ8 538 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 HBS1LQ9Y450 684 aaKnown RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TOMM70O94826 608 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 PMLP29590 882 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 MPP1Q00013 466 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 GRM3Q14832 879 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 SPDYAQ5MJ70 313 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RAP1GAP2Q684P5 730 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TMEM53Q6P2H8 277 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RASAL3Q86YV0 1011 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RBM15BQ8NDT2 890 aaKnown RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 RSPH1Q8WYR4 309 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 GFM2Q969S9 779 aaKnown RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 KLHL4Q9C0H6 718 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 WDR55Q9H6Y2 383 aaPredicted RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 ABCC13Q9NSE7 274 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TRHDEQ9UKU6 1024 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 AAR2Q9Y312 384 aaKnown RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TSC22D4Q9Y3Q8 395 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 LCTP09848 1927 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 UBA6A0AVT1 1052 aaPredicted RBP15.59■□□□□ 0.09
LMNB1-203ENST00000460265 F8W8V4 182 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 BNIP3LO60238 219 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 ANXA9O76027 345 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 PROCP04070 461 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 TSPAN8P19075 237 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 GLUD2P49448 558 aa15.59■□□□□ 0.09
LMNB1-203ENST00000460265 SREBF2Q12772 1141 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 340.9 ms