RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SHC4Q6S5L8 630 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 BRINP3Q76B58 766 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 BHLHA9Q7RTU4 235 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 SLC44A5Q8NCS7 719 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 CMASQ8NFW8 434 aaPredicted RBP3.59□□□□□ -1.83
VPS8-215ENST00000460158 C16orf52Q8NHV5 167 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 RUFY2Q8WXA3 655 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 RPL36ALQ969Q0 106 aaKnown RBP3.59□□□□□ -1.83
VPS8-215ENST00000460158 CFAP53Q96M91 514 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 FRG2BQ96QU4 278 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 SPAG5Q96R06 1193 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 NPLQ9BXD5 320 aaPredicted RBP3.59□□□□□ -1.83
VPS8-215ENST00000460158 TTC12Q9H892 705 aaPredicted RBP3.59□□□□□ -1.83
VPS8-215ENST00000460158 DBNDD1Q9H9R9 158 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 ZCCHC17Q9NP64 241 aaKnown RBP3.59□□□□□ -1.83
VPS8-215ENST00000460158 ALKBH4Q9NXW9 302 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 NLKQ9UBE8 527 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 HEY2Q9UBP5 337 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 SLC13A4Q9UKG4 626 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 OSGIN2Q9Y236 505 aa3.59□□□□□ -1.83
VPS8-215ENST00000460158 TRBV5-7A0A0A0MS05 114 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 OR6C68A6NDL8 312 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 TMEM247A6NEH6 219 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 A6NLC8 198 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 C19orf81C9J6K1 198 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 PER2O15055 1255 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 HBP1O60381 514 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 TULP3O75386 442 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 CHRNB1P11230 501 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 PRF1P14222 555 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 PSMC2P35998 433 aaKnown RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 SLC16A2P36021 539 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 SKIV2L2P42285 1042 aaKnown RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 KRTAP10-9P60411 292 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 GAD2Q05329 585 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 GALNT2Q10471 571 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 PPP2R5CQ13362 524 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 PKP1Q13835 747 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 RABEP1Q15276 862 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 RBMS2Q15434 407 aaKnown RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 PTPN14Q15678 1187 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 SLC18A3Q16572 532 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 SYTL3Q4VX76 610 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 SLC45A4Q5BKX6 768 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 C6orf10Q5SRN2 563 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 SLC9C2Q5TAH2 1124 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 TMEM268Q5VZI3 342 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 AAGABQ6PD74 315 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 CCDC73Q6ZRK6 1079 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 LRRC8DQ7L1W4 858 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 KDELC2Q7Z4H8 507 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 ADGRG6Q86SQ4 1221 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 PIP4P1Q86T03 277 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 IGFN1Q86VF2 1251 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 ERC1Q8IUD2 1116 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 TEX11Q8IYF3 940 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 NANOGP1Q8N7R0 232 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 MSANTD4Q8NCY6 345 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 APPL2Q8NEU8 664 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 RFWD2Q8NHY2 731 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 DENND1AQ8TEH3 1009 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 PIGOQ8TEQ8 1089 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 FAR1Q8WVX9 515 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 CNOT9Q92600 299 aaKnown RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 SH3KBP1Q96B97 665 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 CENPTQ96BT3 561 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 ELP4Q96EB1 424 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 RRP36Q96EU6 259 aaKnown RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 ZFYVE19Q96K21 471 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 CD180Q99467 661 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 WDR83Q9BRX9 315 aaKnown RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 IFT27Q9BW83 186 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 TTYH1Q9H313 450 aaPredicted RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 ACTR5Q9H9F9 607 aaPredicted RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 UBN1Q9NPG3 1134 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 ARGLU1Q9NWB6 273 aaPredicted RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 IRAK4Q9NWZ3 460 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 TUBA8Q9NY65 449 aaPredicted RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 PLEKHB1Q9UF11 243 aaPredicted RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 CNOT7Q9UIV1 285 aaKnown RBP3.58□□□□□ -1.84
VPS8-215ENST00000460158 TBX20Q9UMR3 447 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 COG5Q9UP83 839 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 DHDHQ9UQ10 334 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 MST1RQ04912 1400 aa3.58□□□□□ -1.84
VPS8-215ENST00000460158 B4DLN1 442 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 PROB1E7EW31 1015 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 CHL1O00533 1208 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 MPHOSPH10O00566 681 aaKnown RBP3.57□□□□□ -1.84
VPS8-215ENST00000460158 ATG13O75143 517 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 DDX58O95786 925 aaKnown RBP3.57□□□□□ -1.84
VPS8-215ENST00000460158 FGBP02675 491 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 CHRM4P08173 479 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 GGT5P36269 586 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 NR1H2P55055 460 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 RPE65Q16518 533 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 CCDC30Q5VVM6 783 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 SLC22A25Q6T423 547 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 CCDC129Q6ZRS4 1044 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 BTN2A1Q7KYR7 527 aa3.57□□□□□ -1.84
VPS8-215ENST00000460158 TRIM74Q86UV6 250 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms