RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SMYD3Q9H7B4 428 aa16.02■□□□□ 0.15
CMTM3-203ENST00000460097 UBE2ZQ9H832 354 aaPredicted RBP16.02■□□□□ 0.15
CMTM3-203ENST00000460097 BARX2Q9UMQ3 279 aaPredicted RBP16.02■□□□□ 0.15
CMTM3-203ENST00000460097 DNAJA2O60884 412 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 PDGFRBP09619 1106 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 OR4Q2P0C623 313 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 KRT3P12035 628 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 ITGAXP20702 1163 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 LMO2P25791 158 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 NUMBP49757 651 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 NR1H2P55055 460 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 RAB15P59190 212 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 TSPY1Q01534 308 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 DLX2Q07687 328 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-203ENST00000460097 GPR17Q13304 367 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 DCTN2Q13561 401 aaKnown RBP16.01■□□□□ 0.15
CMTM3-203ENST00000460097 ACBD5Q5T8D3 534 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-203ENST00000460097 TPGS2Q68CL5 300 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 FBXL19Q6PCT2 694 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 KLHDC10Q6PID8 442 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 RBM44Q6ZP01 1051 aaKnown RBP16.01■□□□□ 0.15
CMTM3-203ENST00000460097 RFX6Q8HWS3 928 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 DCP1BQ8IZD4 617 aaKnown RBP16.01■□□□□ 0.15
CMTM3-203ENST00000460097 NUP93Q8N1F7 819 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 SLC25A41Q8N5S1 370 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 FAF2Q96CS3 445 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 EBF4Q9BQW3 602 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 C20orf27Q9GZN8 174 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 SDCBP2Q9H190 292 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 CYP3A43Q9HB55 503 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 PLAC1Q9HBJ0 212 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 MAN1C1Q9NR34 630 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 DZANK1Q9NVP4 752 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 CLIC5Q9NZA1 410 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 CLEC1BQ9P126 229 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 ARHGAP26Q9UNA1 814 aa16.01■□□□□ 0.15
CMTM3-203ENST00000460097 GLRA3O75311 464 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 PIAS1O75925 651 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 HOXB8P17481 243 aaPredicted RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 KCNA5P22460 613 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 ASPAP45381 313 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 RAP1GAPP47736 663 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 HARS2P49590 506 aaKnown RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 TLR1Q15399 786 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 FASTKD1Q53R41 847 aaKnown RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 MDH1BQ5I0G3 518 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 RARS2Q5T160 578 aaKnown RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 FAXCQ5TGI0 409 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 ANKRD54Q6NXT1 300 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 RNF19BQ6ZMZ0 732 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 CROCCP3Q8IVE0 287 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 CTAGE3PQ8IX95 158 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 NDUFAF2Q8N183 169 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 DLG3Q92796 817 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 BCO2Q9BYV7 579 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 KLC2Q9H0B6 622 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 PRDM6Q9NQX0 595 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 SAE1Q9UBE0 346 aaPredicted RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 AFF4Q9UHB7 1163 aaKnown RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 FBXW11Q9UKB1 542 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 CDH9Q9ULB4 789 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 MAFFQ9ULX9 164 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 BCLAF3A2AJT9 711 aaKnown RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 CXorf49A8MYA2 514 aaPredicted RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 ZNF487B1APH4 448 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 PROCP04070 461 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 FGF3P11487 239 aaPredicted RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 TPSB2P20231 275 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 RFC1P35251 1148 aaPredicted RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 DYNLT1P63172 113 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 SMARCB1Q12824 385 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 TPSAB1Q15661 275 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 SLC39A12Q504Y0 691 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 LRRTM3Q86VH5 581 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 KCTD6Q8NC69 237 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 PPP4R1Q8TF05 950 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 ACSF2Q96CM8 615 aaPredicted RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 NMD3Q96D46 503 aaKnown RBP16■□□□□ 0.15
CMTM3-203ENST00000460097 DCUN1D1Q96GG9 259 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 ZNF778Q96MU6 729 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 PGLYRP2Q96PD5 576 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 SERPINI1Q99574 410 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 DCDC2Q9UHG0 476 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 DNAJC16Q9Y2G8 782 aa16■□□□□ 0.15
CMTM3-203ENST00000460097 A0A0J9YVX5 310 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 HMX2A2RU54 273 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 H3BQ06 376 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-203ENST00000460097 ZNF195O14628 629 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 MED7O43513 233 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 HCRTO43612 131 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 PFDN1O60925 122 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 TRUB2O95900 331 aaKnown RBP15.99■□□□□ 0.15
CMTM3-203ENST00000460097 CDK4P11802 303 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 TGM2P21980 687 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 ADSLP30566 484 aaPredicted RBP15.99■□□□□ 0.15
CMTM3-203ENST00000460097 SERPINB6P35237 376 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 SLC1A6P48664 564 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 IDH3AP50213 366 aa15.99■□□□□ 0.15
CMTM3-203ENST00000460097 NADK2Q4G0N4 442 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms