RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PHGDHO43175 533 aaKnown RBP16.88■□□□□ 0.29
CCDC43-202ENST00000457422 HSPA4LO95757 839 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 TBX18O95935 607 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 IGLV3-27P01718 113 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 SBK3P0C264 359 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 FGFR3P22607 806 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 KDSRQ06136 332 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 SEPT6Q14141 434 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 CNGA3Q16281 694 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 PCSK7Q16549 785 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 ALFQ53S48 1182 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 LIPMQ5VYY2 423 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 LRRC8DQ7L1W4 858 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 SLC41A1Q8IVJ1 513 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 CENPLQ8N0S6 344 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-202ENST00000457422 TEX26Q8N6G2 289 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 FBXO27Q8NI29 283 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 RAET1EQ8TD07 263 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 PXYLP1Q8TE99 480 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 GATA5Q9BWX5 397 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-202ENST00000457422 OXCT2Q9BYC2 517 aaPredicted RBP16.88■□□□□ 0.29
CCDC43-202ENST00000457422 COMMD8Q9NX08 183 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 ZNF212Q9UDV6 495 aa16.88■□□□□ 0.29
CCDC43-202ENST00000457422 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 DRGXA6NNA5 263 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 TARM1B6A8C7 271 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 J3KR12 359 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 TM7SF2O76062 418 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 AVPR1AP37288 418 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 SLC1A2P43004 574 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 HK2P52789 917 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 RAB10P61026 200 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 CTBP1Q13363 440 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 KPNB1Q14974 876 aaKnown RBP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 ACSBG2Q5FVE4 666 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 MARC1Q5VT66 337 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 LHX8Q68G74 356 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 EPGNQ6UW88 154 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 KIAA0408Q6ZU52 694 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 ABI1Q8IZP0 508 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 ZNF781Q8N8C0 355 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 SPPL2BQ8TCT7 592 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 STYXQ8WUJ0 223 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 SPATA17Q96L03 361 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 TLR8Q9NR97 1041 aaKnown RBP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 MARCH5Q9NX47 278 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 CPSF2Q9P2I0 782 aaKnown RBP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 HCSTQ9UBK5 93 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 SLC27A5Q9Y2P5 690 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 FAM95CA0A1B0GW59 222 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 HEATR9A2RTY3 570 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 MTMR11A4FU01 709 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 TK2O00142 265 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 HAPLN1P10915 354 aaPredicted RBP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 SELPP16109 830 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 CRABP2P29373 138 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 SMARCB1Q12824 385 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 GPR17Q13304 367 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 THOC5Q13769 683 aaKnown RBP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 RAP1GAP2Q684P5 730 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 FBXL22Q6P050 247 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 MIB1Q86YT6 1006 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 KCNV2Q8TDN2 545 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 STON2Q8WXE9 905 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 IGSF8Q969P0 613 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 RSRC1Q96IZ7 334 aaKnown RBP16.87■□□□□ 0.29
CCDC43-202ENST00000457422 KLHL5Q96PQ7 755 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 DRC3Q9H069 523 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 NT5MQ9NPB1 228 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 ACOT9Q9Y305 439 aa16.87■□□□□ 0.29
CCDC43-202ENST00000457422 F8W8V4 182 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 ARVCFO00192 962 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 NBNO60934 754 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 PAPSS2O95340 614 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-202ENST00000457422 HMBSP08397 361 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 CPB1P15086 417 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 STMN1P16949 149 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 GCKP35557 465 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 MAP2K2P36507 400 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 CD151P48509 253 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 RING1Q06587 406 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 SLC10A7Q0GE19 358 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 TAF10Q12962 218 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 MSLNQ13421 630 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-202ENST00000457422 C10orf120Q5SQS8 335 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 MFSD6LQ8IWD5 586 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 SLC25A41Q8N5S1 370 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 KCTD4Q8WVF5 259 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 WDR60Q8WVS4 1066 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 TADA1Q96BN2 335 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 GPR78Q96P69 363 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 CASD1Q96PB1 797 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 SEPT5Q99719 369 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-202ENST00000457422 CFHR5Q9BXR6 569 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 CRISPLD1Q9H336 500 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 COG4Q9H9E3 785 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 SP110Q9HB58 689 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 MARCH2Q9P0N8 246 aa16.86■□□□□ 0.29
CCDC43-202ENST00000457422 ENPP3O14638 875 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms