RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 INPP5JQ15735 1006 aaPredicted RBP6.47□□□□□ -1.37
COMMD3-204ENST00000456711 DEFB109BQ30KR1 87 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 SV2CQ496J9 727 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 FNDC3BQ53EP0 1204 aaKnown RBP6.47□□□□□ -1.37
COMMD3-204ENST00000456711 ZRANB3Q5FWF4 1079 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 HECTD3Q5T447 861 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 JADE1Q6IE81 842 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 FAM171BQ6P995 826 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 C4orf50Q6ZRC1 276 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 PRPF39Q86UA1 669 aaKnown RBP6.47□□□□□ -1.37
COMMD3-204ENST00000456711 PDCL2Q8N4E4 241 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 GLIS1Q8NBF1 620 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 NAT6Q93015 286 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 GAL3ST3Q96A11 431 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 TMEM159Q96B96 161 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 HDAC11Q96DB2 347 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 SLC45A3Q96JT2 553 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 TMEM74Q96NL1 305 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 CCDC3Q9BQI4 270 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 RSPH9Q9H1X1 276 aaPredicted RBP6.47□□□□□ -1.37
COMMD3-204ENST00000456711 CCSER2Q9H7U1 834 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 CAAP1Q9H8G2 361 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 SH3GLB2Q9NR46 395 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 ARHGAP28Q9P2N2 729 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 MAGEC2Q9UBF1 373 aaPredicted RBP6.47□□□□□ -1.37
COMMD3-204ENST00000456711 PCDHA12Q9UN75 941 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 DMTF1Q9Y222 760 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 PCDHA5Q9Y5H7 936 aa6.47□□□□□ -1.37
COMMD3-204ENST00000456711 CCDC196A0A1B0GTZ2 297 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 FAM221AA4D161 298 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 ARHGEF35A5YM69 484 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 D6RAR5 112 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 MUSKO15146 869 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 DUX1O43812 170 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 CCNT1O60563 726 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 RNASEH2AO75792 299 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 CAPN3P20807 821 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 BDNFP23560 247 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 GUCY2CP25092 1073 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 OAS2P29728 719 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 NUDT1P36639 197 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 TUBP50607 506 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 MAPK10P53779 464 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 RCAN1P53805 252 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 ADPRHP54922 357 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 PEX3P56589 373 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 RNASE9P60153 205 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 PPP2CBP62714 309 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 PPP2CAP67775 309 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 AKAP17AQ02040 695 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 ZRSR2Q15696 482 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 SNX30Q5VWJ9 437 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 SCARA3Q6AZY7 606 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 NEK8Q86SG6 692 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 CD302Q8IX05 232 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 BLIDQ8IZY5 108 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 TMEM86AQ8N2M4 240 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 OR6B3Q8NGW1 331 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 OVCA2Q8WZ82 227 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 GFM1Q96RP9 751 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 OMDQ99983 421 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 HAPLN2Q9GZV7 340 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 CRTAC1Q9NQ79 661 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 KLHL14Q9P2G3 628 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 ORC3Q9UBD5 711 aaPredicted RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 KCND3Q9UK17 655 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 LSM7Q9UK45 103 aaKnown RBP6.46□□□□□ -1.38
COMMD3-204ENST00000456711 PLA2G4CQ9UP65 541 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 DAAM1Q9Y4D1 1078 aa6.46□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3DA0A087WVF3 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3IA0A087WXS9 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3EA0A087X179 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3KA0A087X1G2 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 KLF18A0A0U1RQI7 1052 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3FA6NER0 549 aaPredicted RBP6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3LB9A6J9 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 F8VP50 259 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 PRAMEF26H0Y7S4 382 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 MID1O15344 667 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 HCRTO43612 131 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 ATP2C2O75185 946 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 CBX6O95503 412 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3HP0C7X1 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 YWHAQP27348 245 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 PCSK1P29120 753 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 MATR3P43243 847 aaKnown RBP eCLIP6.45□□□□□ -1.38
COMMD3-204ENST00000456711 HNRNPKP61978 463 aaKnown RBP eCLIP6.45□□□□□ -1.38
COMMD3-204ENST00000456711 IFRD2Q12894 506 aaPredicted RBP6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TMEM132DQ14C87 1099 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 CST6Q15828 149 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 KYAT1Q16773 422 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 C14orf28Q4W4Y0 310 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 PRR30Q53SZ7 412 aaPredicted RBP6.45□□□□□ -1.38
COMMD3-204ENST00000456711 C20orf194Q5TEA3 1177 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3GQ6DHY5 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3CQ6IPX1 549 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 ZPBP2Q6X784 338 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 PRIMA1Q86XR5 153 aa6.45□□□□□ -1.38
COMMD3-204ENST00000456711 TBC1D3Q8IZP1 549 aaPredicted RBP6.45□□□□□ -1.38
COMMD3-204ENST00000456711 ZNF548Q8NEK5 533 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms