RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ENDOD1O94919 500 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 LCA5LO95447 670 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CXCL10P02778 98 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ITGB3P05106 788 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 KRT19P08727 400 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 HNRNPA1P09651 372 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCDC172P0C7W6 258 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 FAM200BP0CF97 657 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ATF7P17544 494 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CYP3A5P20815 502 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 MALP21145 153 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ACO1P21399 889 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TBXAS1P24557 533 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ANXA13P27216 316 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 NOS3P29474 1203 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CYLC1P35663 651 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 USP8P40818 1118 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCR5P51681 352 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCR9P51686 369 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 PRKAA2P54646 552 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 NOP14P78316 857 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLC13A2Q13183 592 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF699Q32M78 642 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 WDR72Q3MJ13 1102 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TRIM60Q495X7 471 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 EMC4Q5J8M3 183 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 C9orf57Q5W0N0 161 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 SLC24A5Q71RS6 500 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 GAREM2Q75VX8 874 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 KRT74Q7RTS7 529 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ECHDC2Q86YB7 292 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 GLB1L2Q8IW92 636 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 HACE1Q8IYU2 909 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 BEND7Q8N7W2 519 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 MSANTD4Q8NCY6 345 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 GPR156Q8NFN8 814 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 BEST2Q8NFU1 509 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CALML6Q8TD86 181 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 LPPQ93052 612 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TRIM43Q96BQ3 446 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 SCARF2Q96GP6 870 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 HPDLQ96IR7 371 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 HIST1H2AHQ96KK5 128 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CNDP2Q96KP4 475 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 FCRL2Q96LA5 508 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 PPP1R10Q96QC0 940 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 YME1L1Q96TA2 773 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 GAD1Q99259 594 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 HIST1H2AJQ99878 128 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 DESI2Q9BSY9 194 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 SYT11Q9BT88 431 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 FTHL17Q9BXU8 183 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 IFIH1Q9BYX4 1025 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 IMPG2Q9BZV3 1241 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 MCOLN1Q9GZU1 580 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 HIPK3Q9H422 1215 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 HAUS4Q9H6D7 363 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 C11orf49Q9H6J7 331 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 EIF2B3Q9NR50 452 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMEM51Q9NW97 253 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 MIOSQ9NXC5 875 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TRMT1Q9NXH9 659 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CALCOCO1Q9P1Z2 691 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ASH2LQ9UBL3 628 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 DUSP13Q9UII6 198 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 TBX21Q9UL17 535 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 UBQLN1Q9UMX0 589 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 CNTN6Q9UQ52 1028 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 ATP11BQ9Y2G3 1177 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 PPP2R2CQ9Y2T4 447 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 REXO2Q9Y3B8 237 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 PAXBP1Q9Y5B6 917 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 UMODL1Q5DID0 1318 aa5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 MKI67P46013 3256 aaKnown RBP5.39□□□□□ -1.55
HMGB1P4-201ENST00000455362 A0A087X0T9 212 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 A0A0U1RQJ8 604 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 ARL5CA6NH57 179 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 BTN3A1O00481 513 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 PIRO00625 290 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 PPEF2O14830 753 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 INPPL1O15357 1258 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCP110O43303 1012 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 RRP9O43818 475 aaKnown RBP5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 OPHN1O60890 802 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 ACTL6BO94805 426 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 HSPA4LO95757 839 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 WEE2P0C1S8 567 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCDC175P0C221 793 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 FTH1P19P0C7X4 201 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 FAM228BP0C875 321 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 MTHFD1P11586 935 aaKnown RBP5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 KRT5P13647 590 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 P4HA1P13674 534 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 CHRNB2P17787 502 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 LRPAP1P30533 357 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 CYP2C18P33260 490 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 MAGEA1P43355 309 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF132P52740 706 aa5.38□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCL23P55773 120 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms