RNA–Protein interactions for RNA: ENST00000451987.5

SPC25-202, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 3

Gene SPC25, Length 596 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-202ENST00000451987 TRIM25Q14258 630 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 STARD3Q14849 445 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 MYBPC3Q14896 1274 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 SLC14A2Q15849 920 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 CYP1B1Q16678 543 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 BEND6Q5SZJ8 279 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 PRAMEF9Q5VWM5 478 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PLEKHA7Q6IQ23 1121 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 NFRKBQ6P4R8 1299 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 SLC27A1Q6PCB7 646 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 TMEM270Q6UE05 265 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 CRELD2Q6UXH1 353 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 RPTNQ6XPR3 784 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 LIPIQ6XZB0 460 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 RFX8Q6ZV50 586 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PDZD4Q76G19 769 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 POLNQ7Z5Q5 900 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 SLCO6A1Q86UG4 719 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 RASAL3Q86YV0 1011 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 DCP2Q8IU60 420 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 RHOT1Q8IXI2 618 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 COLGALT2Q8IYK4 626 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 MCOLN2Q8IZK6 566 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 ARFGAP2Q8N6H7 521 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 NIPA2Q8N8Q9 360 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 CCDC89Q8N998 374 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 ZNF527Q8NB42 609 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PCSK9Q8NBP7 692 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 C3orf20Q8ND61 904 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 BEST2Q8NFU1 509 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 LNX1Q8TBB1 728 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 ZNF564Q8TBZ8 553 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 FAM71BQ8TC56 605 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 CALML6Q8TD86 181 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 RIN2Q8WYP3 895 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 USP6NLQ92738 828 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 ZNF653Q96CK0 615 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 SAAL1Q96ER3 474 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 RBM41Q96IZ5 413 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 NLRP4Q96MN2 994 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 ZNF560Q96MR9 790 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 C8orf49Q96NF6 230 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 JMJD8Q96S16 334 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 RUFY1Q96T51 708 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 MMS19Q96T76 1030 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 MTG1Q9BT17 334 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 ADI1Q9BV57 179 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 TRIM62Q9BVG3 475 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 TTLL2Q9BWV7 592 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 TRIM6Q9C030 488 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 CDT1Q9H211 546 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 ANKZF1Q9H8Y5 726 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PDE11AQ9HCR9 933 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 UBN1Q9NPG3 1134 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 GDF3Q9NR23 364 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 RASSF1Q9NS23 344 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PSD3Q9NYI0 1048 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 CNOT8Q9UFF9 292 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 MTRF1LQ9UGC7 380 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 PCYOX1Q9UHG3 505 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 ZHX1Q9UKY1 873 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 CNOT11Q9UKZ1 510 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 BARX2Q9UMQ3 279 aaPredicted RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 UBQLN1Q9UMX0 589 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 FZD1Q9UP38 647 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 WASF3Q9UPY6 502 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 CORO2BQ9UQ03 480 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 TELO2Q9Y4R8 837 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PCDHB4Q9Y5E5 795 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PCDHA3Q9Y5H8 950 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 ALG6Q9Y672 507 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 SLC4A7Q9Y6M7 1214 aa3.56□□□□□ -1.84
SPC25-202ENST00000451987 PDCD11Q14690 1871 aaKnown RBP3.56□□□□□ -1.84
SPC25-202ENST00000451987 PASKQ96RG2 1323 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 SCN10AQ9Y5Y9 1956 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 C17orf102A2RUQ5 167 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 TMEM150BA6NC51 233 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 GOLGA8IPA6NC78 632 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 POM121BA6NF01 834 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 GOLGA8JA6NMD2 632 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 ZNF487B1APH4 448 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 GOLGA8KD6RF30 607 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 NCAM2O15394 837 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 SEPT4O43236 478 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 CEP104O60308 925 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 NRP2O60462 931 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 TSPAN1O60635 241 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 PHF2O75151 1096 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 RNASEH2AO75792 299 aaKnown RBP3.55□□□□□ -1.84
SPC25-202ENST00000451987 PROSCO94903 275 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 TJP3O95049 919 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 NTRK1P04629 796 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 MMEP08473 750 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 STAG3L1P0CL83 205 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 PNMA6AP0CW24 399 aaPredicted RBP3.55□□□□□ -1.84
SPC25-202ENST00000451987 RARBP10826 455 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 VDRP11473 427 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 C6P13671 934 aa3.55□□□□□ -1.84
SPC25-202ENST00000451987 DARSP14868 501 aaKnown RBP3.55□□□□□ -1.84
SPC25-202ENST00000451987 KCNE1P15382 129 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms