RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 PPP6R3Q5H9R7 873 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
SYNGAP1-204ENST00000449372 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-204ENST00000449372 GABPB2Q8TAK5 448 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-204ENST00000449372 PIWIL2Q8TC59 973 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-204ENST00000449372 PLOD2O00469 737 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 RNASEH2AO75792 299 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 CCNA2P20248 432 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 CXCR2P25025 360 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 ARL1P40616 181 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 ASPAP45381 313 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 KRT6CP48668 564 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 GALNT2Q10471 571 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 GRB14Q14449 540 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 NOMO1Q15155 1222 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 KYAT1Q16773 422 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 BTBD8Q5XKL5 378 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 TMEM192Q8IY95 271 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 PTPN18Q99952 460 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 SERPINE1P05121 402 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 GPD1P21695 349 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 HPCAL1P37235 193 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 THOP1P52888 689 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 DNASE1L3Q13609 305 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 C16orf89Q6UX73 402 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 NEK10Q6ZWH5 1172 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 BTLAQ7Z6A9 289 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 SLC4A11Q8NBS3 891 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 HCAR2Q8TDS4 363 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 CDRT15Q96T59 188 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 HOXD1Q9GZZ0 328 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 CDT1Q9H211 546 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 CYP3A43Q9HB55 503 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 H0YJX3 145 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 AIM2O14862 343 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 MSI1O43347 362 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 DCXO43602 365 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 CLPXO76031 633 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 INSRRP14616 1297 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 MYL6P60660 151 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 ATP6V0D1P61421 351 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 FAM182AQ5T1J6 154 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 PHTF2Q8N3S3 785 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 PDCD6IPQ8WUM4 868 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 OSCP1Q8WVF1 389 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 COL1A2P08123 1366 aa13.63□□□□□ -0.23
SYNGAP1-204ENST00000449372 TBKBP1A7MCY6 615 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 KCNN4O15554 427 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 DDHD2O94830 711 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 BPGMP07738 259 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 MSL3P1P0C860 447 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 L1CAMP32004 1257 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 GTF2A2P52657 109 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 LDLRAP1Q5SW96 308 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF354CQ86Y25 554 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 MINDY2Q8NBR6 621 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 POLR1BQ9H9Y6 1135 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 PCSK1NQ9UHG2 260 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 GPR25O00155 361 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 DDX5P17844 614 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 IDUAP35475 653 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 NUDT2P50583 147 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 DPYSQ14117 519 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 PTK2BQ14289 1009 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 RNF148Q8N7C7 305 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 CMASQ8NFW8 434 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF347Q96SE7 839 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 RTKNQ9BST9 563 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 SIX4Q9UIU6 781 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 PTBP2Q9UKA9 531 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 FGFR3P22607 806 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 BMPR1AP36894 532 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 GRM5P41594 1212 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 HK2P52789 917 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 GPR162Q16538 588 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 INSCQ1MX18 579 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 C16orf46Q6P387 395 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 DSG4Q86SJ6 1040 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 WDTC1Q8N5D0 677 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 NATD1Q8N6N6 113 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 DLG3Q92796 817 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 PRPF19Q9UMS4 504 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 TEX264Q9Y6I9 313 aa13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 PDCD11Q14690 1871 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-204ENST00000449372 CDK2AP1O14519 115 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 JRKO75564 520 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 LYPLA1O75608 230 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 CSPG5O95196 566 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 ADCYAP1R1P41586 468 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 MS4A2Q01362 244 aa13.61□□□□□ -0.23
SYNGAP1-204ENST00000449372 ATAD3BQ5T9A4 648 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms