RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 KDM7AQ6ZMT4 941 aa28.77■■■□□ 2.2
CBX4-202ENST00000448310 STRADAQ7RTN6 431 aa28.77■■■□□ 2.2
CBX4-202ENST00000448310 FAM172AQ8WUF8 416 aa28.77■■■□□ 2.2
CBX4-202ENST00000448310 BBC3Q96PG8 261 aaPredicted RBP28.77■■■□□ 2.2
CBX4-202ENST00000448310 GGT7Q9UJ14 662 aa28.77■■■□□ 2.2
CBX4-202ENST00000448310 ITM2BQ9Y287 266 aa28.77■■■□□ 2.2
CBX4-202ENST00000448310 HS3ST3A1Q9Y663 406 aa28.77■■■□□ 2.2
CBX4-202ENST00000448310 PLEKP08567 350 aaPredicted RBP28.76■■■□□ 2.19
CBX4-202ENST00000448310 UNGP13051 313 aaPredicted RBP28.76■■■□□ 2.19
CBX4-202ENST00000448310 ETFBP38117 255 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 ABCG1P45844 678 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 KYAT3Q6YP21 454 aaKnown RBP28.76■■■□□ 2.19
CBX4-202ENST00000448310 TRIM72Q6ZMU5 477 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 CENPIQ92674 756 aaPredicted RBP28.76■■■□□ 2.19
CBX4-202ENST00000448310 ISG20Q96AZ6 181 aaKnown RBP28.76■■■□□ 2.19
CBX4-202ENST00000448310 TBC1D31Q96DN5 1066 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 GPR27Q9NS67 375 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 LMBRD1Q9NUN5 540 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 FANCLQ9NW38 375 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 SIK3Q9Y2K2 1263 aa28.76■■■□□ 2.19
CBX4-202ENST00000448310 SMG1Q96Q15 3661 aaKnown RBP28.76■■■□□ 2.19
CBX4-202ENST00000448310 IGLON5A6NGN9 336 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 C16orf96A6NNT2 1141 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 AP1G1O43747 822 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 NEBLO76041 1014 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 TPM2P07951 284 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 RFC1P35251 1148 aaPredicted RBP28.75■■■□□ 2.19
CBX4-202ENST00000448310 STAT1P42224 750 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 FZD2Q14332 565 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 DCBLD1Q8N8Z6 715 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 VOPP1Q96AW1 172 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 ADAM22Q9P0K1 906 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 SHROOM3Q8TF72 1996 aa28.75■■■□□ 2.19
CBX4-202ENST00000448310 KRIT1O00522 736 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 RAMP2O60895 175 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 MT-CO3P00414 261 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 KRT3P12035 628 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 EIF2S3P41091 472 aaKnown RBP28.74■■■□□ 2.19
CBX4-202ENST00000448310 NSFP46459 744 aaKnown RBP28.74■■■□□ 2.19
CBX4-202ENST00000448310 E2F1Q01094 437 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 ACAP1Q15027 740 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 SYCP1Q15431 976 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 TPRG1LQ5T0D9 272 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 ATXN7L2Q5T6C5 722 aaPredicted RBP28.74■■■□□ 2.19
CBX4-202ENST00000448310 PLPP6Q8IY26 295 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 PYROXD2Q8N2H3 581 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 NETO2Q8NC67 525 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 OR2AP1Q8NGE2 309 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 FAM174AQ8TBP5 190 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 IFT43Q96FT9 208 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 APOLD1Q96LR9 279 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 PCMTD1Q96MG8 357 aaPredicted RBP28.74■■■□□ 2.19
CBX4-202ENST00000448310 KLF6Q99612 283 aaPredicted RBP28.74■■■□□ 2.19
CBX4-202ENST00000448310 SELENOOQ9BVL4 669 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 MAGEH1Q9H213 219 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 HPCAL4Q9UM19 191 aa28.74■■■□□ 2.19
CBX4-202ENST00000448310 NEMP1O14524 444 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 BRINP1O60477 761 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 GSRP00390 522 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 UGT2B4P06133 528 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 ALPPL2P10696 532 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 CKMT1AP12532 417 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 GPD1P21695 349 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 COPB1P53618 953 aaKnown RBP28.73■■■□□ 2.19
CBX4-202ENST00000448310 SGCGQ13326 291 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 POLD3Q15054 466 aaPredicted RBP28.73■■■□□ 2.19
CBX4-202ENST00000448310 CLEC16AQ2KHT3 1053 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 ZNF805Q5CZA5 627 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 WDR59Q6PJI9 974 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 DCP2Q8IU60 420 aaKnown RBP28.73■■■□□ 2.19
CBX4-202ENST00000448310 CACTIN-AS1Q8N1I8 211 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 C1QTNF2Q9BXJ5 285 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 NLGN3Q9NZ94 848 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 PCDHB1Q9Y5F3 818 aa28.73■■■□□ 2.19
CBX4-202ENST00000448310 LY6G6EA0A0G2JKS1 128 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 SPTY2D1-AS1A0A0U1RR47 76 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 K7ESM1 405 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 SPINT1O43278 529 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 TSPAN6O43657 245 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 GEMIN4P57678 1058 aaKnown RBP28.72■■■□□ 2.19
CBX4-202ENST00000448310 HNRNPKP61978 463 aaKnown RBP eCLIP28.72■■■□□ 2.19
CBX4-202ENST00000448310 SNRPD1P62314 119 aaKnown RBP28.72■■■□□ 2.19
CBX4-202ENST00000448310 PDE1CQ14123 709 aaPredicted RBP28.72■■■□□ 2.19
CBX4-202ENST00000448310 LRRC73Q5JTD7 316 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 ZNF354CQ86Y25 554 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 ZNF548Q8NEK5 533 aaPredicted RBP28.72■■■□□ 2.19
CBX4-202ENST00000448310 NTAN1Q96AB6 310 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 KLHL32Q96NJ5 620 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 RETREG1Q9H6L5 497 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 SEPT11Q9NVA2 429 aaKnown RBP28.72■■■□□ 2.19
CBX4-202ENST00000448310 KLF15Q9UIH9 416 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 U3KQA8 63 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 PTPRQQ9UMZ3 2332 aa28.72■■■□□ 2.19
CBX4-202ENST00000448310 BPTFQ12830 3046 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 CXorf51AA0A1B0GTR3 108 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 NEMP2A6NFY4 417 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 FPGTO14772 594 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 SCAMP1O15126 338 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 RABIFP47224 123 aa28.71■■■□□ 2.19
CBX4-202ENST00000448310 GSCP56915 257 aaPredicted RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms