RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 MED8Q96G25 268 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 ACOX2Q99424 681 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 GID8Q9NWU2 228 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 APPL1Q9UKG1 709 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 A0A087X1B8 175 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 RNF103-CHMP3A0A140T963 221 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 ALDH1A2O94788 518 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 GRK3P35626 688 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 SLC1A6P48664 564 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 MAPKAPK2P49137 400 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 UPP1Q16831 310 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 GRAMD4Q6IC98 578 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 C16orf46Q6P387 395 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 SLC39A5Q6ZMH5 540 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 LONP2Q86WA8 852 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 AGGF1Q8N302 714 aaeCLIP7.49□□□□□ -1.21
SYNE1-213ENST00000448038 MAGEH1Q9H213 219 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 ELOVL6Q9H5J4 265 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 DUS2Q9NX74 493 aaKnown RBP7.49□□□□□ -1.21
SYNE1-213ENST00000448038 AURKCQ9UQB9 309 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 TLR6Q9Y2C9 796 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 FGF18O76093 207 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 GALTP07902 379 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 IL10P22301 178 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 SOX4Q06945 474 aaPredicted RBP7.49□□□□□ -1.21
SYNE1-213ENST00000448038 GPR17Q13304 367 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 ANKS6Q68DC2 871 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 TTC27Q6P3X3 843 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 CHST9Q7L1S5 443 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 PRCCQ92733 491 aaPredicted RBP7.49□□□□□ -1.21
SYNE1-213ENST00000448038 MYO19Q96H55 970 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 SGIP1Q9BQI5 828 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 ACSS3Q9H6R3 686 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 NOP53Q9NZM5 478 aaKnown RBP7.49□□□□□ -1.21
SYNE1-213ENST00000448038 FBXO10Q9UK96 956 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 TDRKHQ9Y2W6 561 aaKnown RBP7.49□□□□□ -1.21
SYNE1-213ENST00000448038 A0A1B0GUL6 1792 aa7.49□□□□□ -1.21
SYNE1-213ENST00000448038 TCRBV9S1A1TA0A576 114 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 SOCS7O14512 581 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PTPN3P26045 913 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GPR1P46091 355 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GPR15P49685 360 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CLCN5P51795 746 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 NDST2P52849 883 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 THOP1P52888 689 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CTBP1Q13363 440 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CNGA3Q16281 694 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 DPYSL2Q16555 572 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PTPRNQ16849 979 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 RAET1GQ6H3X3 334 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 FAM45BPQ6NSW5 357 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 KYAT3Q6YP21 454 aaKnown RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 HFE2Q6ZVN8 426 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 MARK2Q7KZI7 788 aaKnown RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 DET1Q7L5Y6 550 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 FAM45AQ8TCE6 357 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 HAPLN3Q96S86 360 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 EVLQ9UI08 416 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 FBXO5Q9UKT4 447 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 C5orf58C9J3I9 102 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ZBTB14O43829 449 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 KATNA1O75449 491 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ITGBL1O95965 494 aaPredicted RBP7.48□□□□□ -1.21
SYNE1-213ENST00000448038 APODP05090 189 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PCNAP12004 261 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 TPSB2P20231 275 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 DGKAP23743 735 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 SOX11P35716 441 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 SERPINB5P36952 375 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CDK7P50613 346 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PRKAA2P54646 552 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 HSPA14Q0VDF9 509 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 PRKAA1Q13131 559 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 TPSAB1Q15661 275 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 STXBP5Q5T5C0 1151 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 LRRC8BQ6P9F7 803 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CCDC138Q96M89 665 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 NDNQ99608 321 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 SMOQ99835 787 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GBA3Q9H227 469 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 R3HDMLQ9H3Y0 253 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 VRTNQ9H8Y1 702 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CRTAC1Q9NQ79 661 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GIMAP4Q9NUV9 329 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 SYNDIG1LA6NDD5 238 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 MATN3O15232 486 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 MT-CO1P00395 513 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CCDC166P0CW27 439 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 IL1R2P27930 398 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 COPAP53621 1224 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 DSC2Q02487 901 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 STX5Q13190 355 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 GPSM1Q86YR5 675 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ZNF567Q8N184 647 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 CPT1BQ92523 772 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 NTAN1Q96AB6 310 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
SYNE1-213ENST00000448038 TMEM120AQ9BXJ8 343 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms