RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 GJB6O95452 261 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 ADCY5O95622 1261 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 ADKP55263 362 aaKnown RBP14.67□□□□□ -0.06
HMGN1-208ENST00000443046 EIF3IQ13347 325 aaKnown RBP14.67□□□□□ -0.06
HMGN1-208ENST00000443046 SPIDRQ14159 915 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 B3GNT8Q7Z7M8 397 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 RBFAQ8N0V3 343 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 DENND6BQ8NEG7 585 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 GLMNQ92990 594 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 CEP44Q9C0F1 390 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 CLPBQ9H078 707 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 IPO11Q9UI26 975 aaKnown RBP14.67□□□□□ -0.06
HMGN1-208ENST00000443046 PADI4Q9UM07 663 aa14.67□□□□□ -0.06
HMGN1-208ENST00000443046 USP9YO00507 2555 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-208ENST00000443046 IGLV3-10A0A075B6K4 115 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 TSPAN6O43657 245 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 GRAP2O75791 330 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 CD160O95971 181 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 KRT5P13647 590 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 UGT1A5P35504 534 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 CXCR3P49682 368 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 NFKB2Q00653 900 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 NME3Q13232 169 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 SRSF6Q13247 344 aaKnown RBP14.66□□□□□ -0.06
HMGN1-208ENST00000443046 SGCGQ13326 291 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 TGIF1Q15583 401 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 PRRT3Q5FWE3 981 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 OLFML1Q6UWY5 402 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 USP53Q70EK8 1073 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 PARS2Q7L3T8 475 aaKnown RBP14.66□□□□□ -0.06
HMGN1-208ENST00000443046 PLPP6Q8IY26 295 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 PCDH20Q8N6Y1 951 aaKnown RBP14.66□□□□□ -0.06
HMGN1-208ENST00000443046 EXTL1Q92935 676 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 NT5C3BQ969T7 300 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 C1orf74Q96LT6 269 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 HEPHQ9BQS7 1158 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 LRRC61Q9BV99 259 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 SIK2Q9H0K1 926 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 PIGVQ9NUD9 493 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 APOBEC3BQ9UH17 382 aaKnown RBP14.66□□□□□ -0.06
HMGN1-208ENST00000443046 RABGEF1Q9UJ41 708 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 UNC13CQ8NB66 2214 aa14.66□□□□□ -0.06
HMGN1-208ENST00000443046 TMX2-CTNND1H3BSU7 103 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 NVLO15381 856 aaKnown RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 THAP12O43422 761 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 DAB1O75553 588 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 ENDOD1O94919 500 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 SFTPCP11686 197 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 GNA15P30679 374 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 NOS2P35228 1153 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 RECQLP46063 649 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 SERPINH1P50454 418 aaKnown RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 INHBCP55103 352 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 SLC20A2Q08357 652 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 C1orf61Q13536 156 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 PTK2BQ14289 1009 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 CARD16Q5EG05 197 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 BRMS1LQ5PSV4 323 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 RETSATQ6NUM9 610 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 ZNF783Q6ZMS7 281 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 ZNF574Q6ZN55 896 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 FAM183BPQ6ZVS7 135 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 RAB11FIP2Q7L804 512 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 PHACTR4Q8IZ21 702 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 FBXO39Q8N4B4 442 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 ZNF397Q8NF99 534 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 RAB7BQ96AH8 199 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 PPP1R13BQ96KQ4 1090 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 NPY6RQ99463 290 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 SCAND2PQ9GZW5 306 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 INTS2Q9H0H0 1204 aaKnown RBP14.65□□□□□ -0.06
HMGN1-208ENST00000443046 TKTL2Q9H0I9 626 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 GGT7Q9UJ14 662 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 CHD5Q8TDI0 1954 aa14.65□□□□□ -0.06
HMGN1-208ENST00000443046 CXorf51AA0A1B0GTR3 108 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 A0A1W2PQM1 296 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 ILVBLA1L0T0 632 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 BECN2A8MW95 431 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 M0QYT0 321 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 ANXA6P08133 673 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 FAM87AP0C7U9 286 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 LIPCP11150 499 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 TSHRP16473 764 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 CCKBRP32239 447 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 ABL2P42684 1182 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 CCNHP51946 323 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-208ENST00000443046 YPEL5P62699 121 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 ARF5P84085 180 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 CCDC40Q4G0X9 1142 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 TTI2Q6NXR4 508 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 FOXR2Q6PJQ5 311 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 C11orf57Q6ZUT1 292 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-208ENST00000443046 SLC26A9Q7LBE3 791 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 TRIM59Q8IWR1 403 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 FMR1NBQ8N0W7 255 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-208ENST00000443046 OR7D4Q8NG98 312 aa14.64□□□□□ -0.07
HMGN1-208ENST00000443046 PGAP3Q96FM1 320 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-208ENST00000443046 CCDC34Q96HJ3 373 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms