RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ZNF865P0CJ78 1059 aaPredicted RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 PGAM1P18669 254 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 MPSTP25325 297 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 GMPRP36959 345 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 GP5P40197 560 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 MBTD1Q05BQ5 628 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TRAP1Q12931 704 aaKnown RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 GRIK4Q16099 956 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 DCAF6Q58WW2 860 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 MTX3Q5HYI7 312 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 GRTP1Q5TC63 336 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 OGFOD2Q6N063 350 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 ZBTB49Q6ZSB9 765 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 TTC30AQ86WT1 665 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 ANKFN1Q8N957 763 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 FAM156AQ8NDB6 213 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 CD99L2Q8TCZ2 262 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 AGR3Q8TD06 166 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TMA16Q96EY4 203 aaKnown RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 COG8Q96MW5 612 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 NPLQ9BXD5 320 aaPredicted RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 CXCL16Q9H2A7 254 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 C20orf96Q9NUD7 363 aaPredicted RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 TXNDC16Q9P2K2 825 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 GABRQQ9UN88 632 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 SNX13Q9Y5W8 968 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TCRBV3S1A0A5B6 114 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 MYADML2A6NDP7 307 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 C2CD4BA6NLJ0 364 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 GRID2O43424 1007 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 MAP3K6O95382 1288 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 STAMBPO95630 424 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 VDRP11473 427 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 FGFR3P22607 806 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 SLC26A2P50443 739 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 PSME3P61289 254 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 DGKDQ16760 1214 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 RAB6CQ53S08 254 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 IRAK1BP1Q5VVH5 260 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TTC33Q6PID6 262 aaPredicted RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 XKR5Q6UX68 686 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TLK2Q86UE8 772 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 HERC6Q8IVU3 1022 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 PLD6Q8N2A8 252 aaKnown RBP12.05□□□□□ -0.48
LTBR-203ENST00000441074 SCAIQ8N9R8 606 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 LRRN4Q8WUT4 740 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 RXFP2Q8WXD0 754 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 SLCO4A1Q96BD0 722 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TMEM176AQ96HP8 235 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 TBCBQ99426 244 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 CIB1Q99828 191 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 CPNE1Q99829 537 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 RAB6CQ9H0N0 254 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 ADA2Q9NZK5 511 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 VTI1BQ9UEU0 232 aa12.05□□□□□ -0.48
LTBR-203ENST00000441074 SLCO1B7G3V0H7 640 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 DPYSL4O14531 572 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 AKAP10O43572 662 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CILPO75339 1184 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 PDGFRAP16234 1089 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 TFEBP19484 476 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 MYF6P23409 242 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ATICP31939 592 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 RAP1GAPP47736 663 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ATF7IP2Q5U623 682 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 HMBOX1Q6NT76 420 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CMC1Q7Z7K0 106 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ZNF354CQ86Y25 554 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 DCLK2Q8N568 766 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 TTC39CQ8N584 583 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 SLC7A14Q8TBB6 771 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 ARNTL2Q8WYA1 636 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 NPAS2Q99743 824 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 NAT9Q9BTE0 207 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 TDRD1Q9BXT4 1180 aaKnown RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 DRC3Q9H069 523 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 VRTNQ9H8Y1 702 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 RPF1Q9H9Y2 349 aaKnown RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 OXSMQ9NWU1 459 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 TRNAU1APQ9NX07 287 aaKnown RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 CDYLQ9Y232 598 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 B3GNT3Q9Y2A9 372 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 A0A1W2PPW3 197 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 E2F8A0AVK6 867 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 TMX2-CTNND1H3BSU7 103 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 PAPSS1O43252 624 aaPredicted RBP12.04□□□□□ -0.48
LTBR-203ENST00000441074 MPOP05164 745 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CHRNGP07510 517 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 KRT19P08727 400 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CXCL8P10145 99 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 BMP2P12643 396 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 GPD2P43304 727 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 BMXP51813 675 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 LBX1P52954 281 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 CRADDP78560 199 aa12.04□□□□□ -0.48
LTBR-203ENST00000441074 NSUN2Q08J23 767 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms