RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PES1O00541 588 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 APOL1O14791 398 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 PPM1DO15297 605 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 PPIP5K2O43314 1243 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC37A4O43826 429 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 UNC5CO95185 931 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 AGR2O95994 175 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 AHSGP02765 367 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CSTBP04080 98 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ELFN1P0C7U0 828 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 KITP10721 976 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 HARSP12081 509 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 IDEP14735 1019 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 EN2P19622 333 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 KELP23276 732 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CYP3A7P24462 503 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 EPHB2P29323 1055 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CHRNA5P30532 468 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC7A1P30825 629 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CYP2C18P33260 490 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MTIF2P46199 727 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MMP14P50281 582 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ARFIP2P53365 341 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 TUBB4BP68371 445 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 KRT83P78385 493 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 HOXA4Q00056 320 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 KRT17Q04695 432 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 LRRC63Q05C16 580 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MTF1Q14872 753 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC15A2Q16348 729 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CDC37Q16543 378 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MTX3Q5HYI7 312 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 HYIQ5T013 277 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 TREML2Q5T2D2 321 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ARHGAP40Q5TG30 622 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 WDR78Q5VTH9 848 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 KLHDC7AQ5VTJ3 777 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 LMBRD2Q68DH5 695 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC9A4Q6AI14 798 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CENPPQ6IPU0 288 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 USP17L6PQ6QN14 398 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MOXD1Q6UVY6 613 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 PARS2Q7L3T8 475 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 C1QL2Q7Z5L3 287 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 PPP1R3BQ86XI6 285 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC65Q8IXS2 484 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC15A3Q8IY34 581 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 GUF1Q8N442 669 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 GMCL1P1Q8NEA9 526 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ABHD11Q8NFV4 315 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ERMNQ8TAM6 284 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 RPL36ALQ969Q0 106 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MPP4Q96JB8 637 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 PRMT6Q96LA8 375 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CNOT6LQ96LI5 555 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 TBATAQ96M53 351 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MBOAT7Q96N66 472 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 WDR24Q96S15 920 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 TSG101Q99816 390 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CARD6Q9BX69 1037 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMEM120AQ9BXJ8 343 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 STK33Q9BYT3 514 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 NT5C3AQ9H0P0 336 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 HAUS4Q9H6D7 363 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 TDRD3Q9H7E2 651 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 DNAJC18Q9H819 358 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MRPL44Q9H9J2 332 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 LZTFL1Q9NQ48 299 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 BLOC1S4Q9NUP1 217 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 PANK4Q9NVE7 773 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNHIT6Q9NWK9 470 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 TMOD2Q9NZR1 351 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 OGFRQ9NZT2 677 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYO1AQ9UBC5 1043 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 CPNE7Q9UBL6 633 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 HERC5Q9UII4 1024 aaKnown RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 SERTAD3Q9UJW9 196 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ADAM21Q9UKJ8 722 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 OGDHLQ9ULD0 1010 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ADAMTS5Q9UNA0 930 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 MED16Q9Y2X0 877 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 PCDHAC2Q9Y5I4 1007 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 RPS6KL1Q9Y6S9 549 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 V9GYY5 206 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 ABCB11O95342 1321 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 KDM3AQ9Y4C1 1321 aa3.68□□□□□ -1.82
HMGB3P11-201ENST00000440127 QSER1Q2KHR3 1735 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 NRXN2Q9P2S2 1712 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 A0A1B0GVC2 190 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 TTC26A0AVF1 554 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CTAGE9A4FU28 777 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 WIPF3A6NGB9 483 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PRSS29PA6NIE9 313 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CGB1A6NKQ9 187 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 B4DLN1 442 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 E9PMD0 336 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 H0YIZ8 118 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PSMD9O00233 223 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PPP6CO00743 305 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms