RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 H3BNH8 94 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 NRP1O14786 923 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 BAIAP3O94812 1187 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 KCNH1O95259 989 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ALBP02768 609 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ERCC2P18074 760 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 GLDCP23378 1020 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 RPL26P61254 145 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 PITX1P78337 314 aaPredicted RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 NAB1Q13506 487 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DPYSQ14117 519 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 GALNT18Q6P9A2 607 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 CAMK1DQ8IU85 385 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 FBXO16Q8IX29 292 aaPredicted RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 DHRSXQ8N5I4 330 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 PAF1Q8N7H5 531 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DNAJB14Q8TBM8 379 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ARNTL2Q8WYA1 636 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 TUBGCP3Q96CW5 907 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ASB9Q96DX5 294 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 RPL10LQ96L21 214 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 KLHL25Q9H0H3 589 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 EML4Q9HC35 981 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 FBRSL1Q9HCM7 1045 aaKnown RBP9.16□□□□□ -0.94
COPB1-202ENST00000439561 DDIT4Q9NX09 232 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 HOXC10Q9NYD6 342 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ADAM28Q9UKQ2 775 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 ZNF510Q9Y2H8 683 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 CNTNAP1P78357 1384 aa9.16□□□□□ -0.94
COPB1-202ENST00000439561 DHRS12A0PJE2 317 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 PPEF2O14830 753 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 DLX3O60479 287 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FARP2O94887 1054 aaPredicted RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 HSPA1AP0DMV8 641 aaKnown RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 HSPA1BP0DMV9 641 aaKnown RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 NCAM1P13591 858 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 CDH3P22223 829 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 YWHAQP27348 245 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 PCYT1AP49585 367 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 YWHAHQ04917 246 aaPredicted RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 GJC2Q5T442 439 aaPredicted RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 STXBP5Q5T5C0 1151 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FAM219BQ5XKK7 198 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ZYG11AQ6WRX3 759 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 CHSY3Q70JA7 882 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 CATSPER4Q7RTX7 472 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FAM83AQ86UY5 434 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FIBCD1Q8N539 461 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 CNTD1Q8N815 330 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 TNIP2Q8NFZ5 429 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ZC3H15Q8WU90 426 aaKnown RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 EDEM1Q92611 657 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 BORCS5Q969J3 196 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 SDCCAG3Q96C92 435 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 GPATCH1Q9BRR8 931 aaKnown RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 ADI1Q9BV57 179 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FTHL17Q9BXU8 183 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 PLEKHA5Q9HAU0 1116 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ZFYVE28Q9HCC9 887 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 GPRC5DQ9NZD1 345 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 GIMAP2Q9UG22 337 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FADS3Q9Y5Q0 445 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 SNX10Q9Y5X0 201 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 PRORSD1PA6NEY8 169 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 HACD1B0YJ81 288 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 SOCS2O14508 198 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ZNF195O14628 629 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 NRP2O60462 931 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 TXNP10599 105 aaKnown RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 PCNAP12004 261 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ATICP31939 592 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 LSM3P62310 102 aaKnown RBP9.15□□□□□ -0.94
COPB1-202ENST00000439561 DPYSL2Q16555 572 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 UGP2Q16851 508 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FBXO48Q5FWF7 155 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FGD3Q5JSP0 725 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 SPATA22Q8NHS9 363 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 SLC25A23Q9BV35 468 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 FICDQ9BVA6 458 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 RMI1Q9H9A7 625 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 SNTG2Q9NY99 539 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ZNF229Q9UJW7 825 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 KIAA1257Q9ULG3 409 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 TRIM17Q9Y577 477 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 SQORQ9Y6N5 450 aa9.15□□□□□ -0.94
COPB1-202ENST00000439561 ABCA3Q99758 1704 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 SH3PXD2BA1X283 911 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 TTC36A6NLP5 189 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 CLDN5O00501 218 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 GRID2O43424 1007 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 NCK1P16333 377 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 BCAT1P54687 386 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 RHDQ02161 417 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 PRKCQQ04759 706 aa9.15□□□□□ -0.95
COPB1-202ENST00000439561 BST2Q10589 180 aaKnown RBP9.15□□□□□ -0.95
COPB1-202ENST00000439561 ITGA7Q13683 1181 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms