RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 P2RX3P56373 397 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 ACTR2P61160 394 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 SMAD1Q15797 465 aaKnown RBP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 FBXO47Q5MNV8 452 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 C10orf76Q5T2E6 689 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 VWA5B1Q5TIE3 1220 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 CYP26C1Q6V0L0 522 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 B4GALNT4Q76KP1 1039 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 TRAPPC11Q7Z392 1133 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 GPSM1Q86YR5 675 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 HERC6Q8IVU3 1022 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 TMEM57Q8N5G2 664 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 FSIP1Q8NA03 581 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 LINS1Q8NG48 757 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 SPPL3Q8TCT6 385 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 WASF1Q92558 559 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 KCNJ9Q92806 393 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 INPP5DQ92835 1189 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 ARRDC3Q96B67 414 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 RBM17Q96I25 401 aaKnown RBP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 EIF2AK1Q9BQI3 630 aaKnown RBP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 MAP6D1Q9H9H5 199 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 PDE11AQ9HCR9 933 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 G6PC2Q9NQR9 355 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 GGA3Q9NZ52 723 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 C9orf78Q9NZ63 289 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 ANAPC4Q9UJX5 808 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 GTF2A1LQ9UNN4 478 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 DERAQ9Y315 318 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 RRP7AQ9Y3A4 280 aaKnown RBP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 COPG1Q9Y678 874 aaKnown RBP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 LAMC1P11047 1609 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 KANK1Q14678 1352 aa3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 CFAP65Q6ZU64 1925 aaKnown RBP3.62□□□□□ -1.83
HMGB3P12-201ENST00000438745 ZFYVE9O95405 1425 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 PRAG1Q86YV5 1406 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 NWD2Q9ULI1 1742 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CCDC141Q6ZP82 1450 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 MBD3L5A6NJ08 208 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 GRM8O00222 908 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 NFATC1O95644 943 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 AGR2O95994 175 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CSF1P09603 554 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 PAX3P23760 479 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CIITAP33076 1130 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CDKN2AP42771 156 aaKnown RBP3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 PCP4P48539 62 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 TBRG1Q3YBR2 411 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 ZNF484Q5JVG2 852 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 Q5PR19 223 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CYB5R4Q7L1T6 521 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 KDELC2Q7Z4H8 507 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 TMEM199Q8N511 208 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 IP6K1Q92551 441 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 STAMQ92783 540 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 EVI5LQ96CN4 794 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 URB1-AS1Q96HZ7 61 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 ADAD1Q96M93 576 aaKnown RBP3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 PIGSQ96S52 555 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 HERC2P3Q9BVR0 1158 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 HDHD5Q9BXW7 423 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 HIPK2Q9H2X6 1198 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 AAMDCQ9H7C9 122 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 SLC22A11Q9NSA0 550 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 TNFSF13BQ9Y275 285 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 TRIP12Q14669 1992 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CROCC2H7BZ55 1655 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 THSD7AQ9UPZ6 1657 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CKAP5Q14008 2032 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CEP152O94986 1710 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 CCDC144AA2RUR9 1427 aa3.61□□□□□ -1.83
HMGB3P12-201ENST00000438745 MBD5Q9P267 1494 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 CLEC18AA5D8T8 446 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 NCAM2O15394 837 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 TFRCP02786 760 aaKnown RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 HSPA8P11142 646 aaKnown RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 ACP5P13686 325 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 CHN1P15882 459 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 RFX2P48378 723 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 RHAGQ02094 409 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 CDK18Q07002 472 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 DCTN1Q14203 1278 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 PLK5Q496M5 336 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 ARL13AQ5H913 290 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 PARM1Q6UWI2 310 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 CPOQ8IVL8 374 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 VPS52Q8N1B4 723 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 PAF1Q8N7H5 531 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 KDM1BQ8NB78 822 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 CLEC18CQ8NCF0 446 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 ADAMTS15Q8TE58 950 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 ASB5Q8WWX0 329 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 SDCCAG3Q96C92 435 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 KTI12Q96EK9 354 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 TWSG1Q9GZX9 223 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 NOD2Q9HC29 1040 aa3.6□□□□□ -1.83
HMGB3P12-201ENST00000438745 TLR8Q9NR97 1041 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms