RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ANKRD20A4Q4UJ75 823 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 SPOUT1Q5T280 376 aaKnown RBP14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 FSTL4Q6MZW2 842 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 ATG14Q6ZNE5 492 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 PLD6Q8N2A8 252 aaKnown RBP14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 DNAJC5GQ8N7S2 189 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 RAB3IL1Q8TBN0 382 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 IGSF21Q96ID5 467 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 TUBGCP5Q96RT8 1024 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 CASS4Q9NQ75 786 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 DCDC2Q9UHG0 476 aa14.09□□□□□ -0.15
PTCHD3-201ENST00000438700 TRIM43BA6NCK2 446 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 B2RBV5 119 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 HAPLN1P10915 354 aaPredicted RBP14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 YWHAQP27348 245 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 CCR1P32246 355 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 PGGT1BP53609 377 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 NAB1Q13506 487 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 UBAP2LQ14157 1087 aaKnown RBP14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 KRT72Q14CN4 511 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 USP41Q3LFD5 358 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 BRMS1LQ5PSV4 323 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 TEDDM1Q5T9Z0 273 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 TMEM135Q86UB9 458 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 FBXO22Q8NEZ5 403 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 SPATA22Q8NHS9 363 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 FBXO32Q969P5 355 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 TOP1MTQ969P6 601 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 TRIM43Q96BQ3 446 aaPredicted RBP14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 TTC1Q99614 292 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 ZNF184Q99676 751 aaPredicted RBP14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 RBBP8Q99708 897 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 C20orf96Q9NUD7 363 aaPredicted RBP14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 RPL26L1Q9UNX3 145 aaKnown RBP14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 RAD54BQ9Y620 910 aa14.08□□□□□ -0.15
PTCHD3-201ENST00000438700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 MAP3K7O43318 606 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 PAGE1O75459 146 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 EFEMP2O95967 443 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 PROCP04070 461 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 ARRB2P32121 409 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 IRF9Q00978 393 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 PSMD5Q16401 504 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 ITPRIPL1Q6GPH6 555 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 KCNMB4Q86W47 210 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 ARHGAP18Q8N392 663 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 CNTD1Q8N815 330 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 ACVR1CQ8NER5 493 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 ZNF419Q96HQ0 510 aaPredicted RBP14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 TEKT5Q96M29 485 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 TUBB6Q9BUF5 446 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 OSBPL2Q9H1P3 480 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 IL37Q9NZH6 218 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 COPG2Q9UBF2 871 aa14.08□□□□□ -0.16
PTCHD3-201ENST00000438700 ABHD14A-ACY1A0A1B0GW23 586 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 MAGEA13PA6NCF6 341 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 CAPN14A8MX76 684 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 MTSS1O43312 755 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 MT-CYBP00156 380 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 TIMP1P01033 207 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 LYNP07948 512 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 HSPA8P11142 646 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 NMBRP28336 390 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 SMARCB1Q12824 385 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 LAMB3Q13751 1172 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 ITGA9Q13797 1035 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 LRRC36Q1X8D7 754 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 GRTP1Q5TC63 336 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 IZUMO2Q6UXV1 221 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 PPFIBP2Q8ND30 876 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 PIWIL2Q8TC59 973 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 ZFAND2BQ8WV99 257 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 SERPINB11Q96P15 392 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 OXCT2Q9BYC2 517 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 IARS2Q9NSE4 1012 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 MTRRQ9UBK8 725 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 TRHDEQ9UKU6 1024 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 FAM92AA1XBS5 289 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 PRR5-ARHGAP8B1AHC4 643 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 BAG2O95816 211 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 SAT1P21673 171 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 GSTT1P30711 240 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 OR1D2P34982 312 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 SPRP35270 261 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 ZNF135P52742 658 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 LIMK2P53671 638 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 ARHGAP8P85298 464 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 TAF10Q12962 218 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 SLC8B1Q6J4K2 584 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 KIAA1841Q6NSI8 718 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 WDR75Q8IWA0 830 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 RBM15BQ8NDT2 890 aaKnown RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 ZSCAN18Q8TBC5 510 aaPredicted RBP14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 GIPC2Q8TF65 315 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 SPATA17Q96L03 361 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 PANX3Q96QZ0 392 aa14.07□□□□□ -0.16
PTCHD3-201ENST00000438700 UBE2OQ9C0C9 1292 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms