RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 TMA16Q96EY4 203 aaKnown RBP7.12□□□□□ -1.27
TOP3B-208ENST00000437929 WBP1Q96G27 269 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 MRFAP1L1Q96HT8 127 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 HIC2Q96JB3 615 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 KREMEN1Q96MU8 473 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 ZNF578Q96N58 590 aaPredicted RBP7.12□□□□□ -1.27
TOP3B-208ENST00000437929 CDK5RAP1Q96SZ6 601 aaKnown RBP7.12□□□□□ -1.27
TOP3B-208ENST00000437929 DUSP16Q9BY84 665 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 BLZF1Q9H2G9 400 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 TNMDQ9H2S6 317 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 APOBEC3GQ9HC16 384 aaKnown RBP7.12□□□□□ -1.27
TOP3B-208ENST00000437929 SUCOQ9UBS9 1254 aaKnown RBP7.12□□□□□ -1.27
TOP3B-208ENST00000437929 SUN2Q9UH99 717 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 CA5BQ9Y2D0 317 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 NAV2Q8IVL1 2488 aa7.12□□□□□ -1.27
TOP3B-208ENST00000437929 UBE4BO95155 1302 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3DA0A087WVF3 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3IA0A087WXS9 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3EA0A087X179 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3KA0A087X1G2 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3FA6NER0 549 aaPredicted RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TTC34A8MYJ7 566 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3LB9A6J9 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TULP2O00295 520 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 FFAR2O15552 330 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 RNASEH1O60930 286 aaKnown RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 CSO75390 466 aaKnown RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 CBX7O95931 251 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 ASS1P00966 412 aaKnown RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 HLA-DRAP01903 254 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 ATP5BP06576 529 aaKnown RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3HP0C7X1 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TRIM21P19474 475 aaKnown RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 SLC8A1P32418 973 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 RXRGP48443 463 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 METAP1P53582 386 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 AP3M2P53677 418 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 PMS1P54277 932 aaKnown RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 ADPRHP54922 357 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 ST8SIA6P61647 398 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 RNF4P78317 190 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 NFKB2Q00653 900 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 SRSF1Q07955 248 aaKnown RBP eCLIP7.11□□□□□ -1.278e-10■■□□□ 12.6
TOP3B-208ENST00000437929 INCA1Q0VD86 236 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 NFATC3Q12968 1075 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 SERINC3Q13530 473 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 BBS9Q3SYG4 887 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 ZACNQ401N2 412 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 CYP27C1Q4G0S4 372 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 SLC45A4Q5BKX6 768 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 C3orf38Q5JPI3 329 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3GQ6DHY5 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3CQ6IPX1 549 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 OGFOD3Q6PK18 319 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 MMS22LQ6ZRQ5 1243 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 ZNF765Q7L2R6 523 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 KIAA0907Q7Z7F0 614 aaPredicted RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 PIGZQ86VD9 579 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 C12orf56Q8IXR9 622 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 TBC1D3Q8IZP1 549 aaPredicted RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 MED8Q96G25 268 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 VCPIP1Q96JH7 1222 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 HEXIM2Q96MH2 286 aaKnown RBP7.11□□□□□ -1.27
TOP3B-208ENST00000437929 DEPDC7Q96QD5 511 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 USP28Q96RU2 1077 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 MYOCQ99972 504 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 ULBP1Q9BZM6 244 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 PIF1Q9H611 641 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 MMRN2Q9H8L6 949 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 UCKL1Q9NWZ5 548 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 SCML1Q9UN30 329 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 BOD1L1Q8NFC6 3051 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 KNTC1P50748 2209 aa7.11□□□□□ -1.27
TOP3B-208ENST00000437929 A0A1B0GVM2 712 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 MSTNO14793 375 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 OPA1O60313 960 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 RTN2O75298 545 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 RPN1P04843 607 aaKnown RBP7.1□□□□□ -1.27
TOP3B-208ENST00000437929 F13BP05160 661 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 CENPBP07199 599 aaPredicted RBP7.1□□□□□ -1.27
TOP3B-208ENST00000437929 SLC6A4P31645 630 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 CSKP41240 450 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 CSRP3P50461 194 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 CCR5P51681 352 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 TKTL1P51854 596 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 SNRPFP62306 86 aaKnown RBP7.1□□□□□ -1.27
TOP3B-208ENST00000437929 E2F1Q01094 437 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 NCAPHQ15003 741 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 RABEP1Q15276 862 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 KNOP1Q1ED39 458 aaKnown RBP7.1□□□□□ -1.27
TOP3B-208ENST00000437929 HNRNPA1L2Q32P51 320 aaKnown RBP7.1□□□□□ -1.27
TOP3B-208ENST00000437929 COLEC12Q5KU26 742 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 SFRP5Q5T4F7 317 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 ADGRF1Q5T601 910 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 C9orf64Q5T6V5 341 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 NAPEPLDQ6IQ20 393 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.1□□□□□ -1.27
TOP3B-208ENST00000437929 BHLHA9Q7RTU4 235 aa7.1□□□□□ -1.27
TOP3B-208ENST00000437929 MFN1Q8IWA4 741 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms