RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 SPON2Q9BUD6 331 aa11.66□□□□□ -0.54
SNHG3-202ENST00000437681 CINPQ9BW66 212 aaPredicted RBP11.66□□□□□ -0.54
SNHG3-202ENST00000437681 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
SNHG3-202ENST00000437681 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
SNHG3-202ENST00000437681 TCRBV21S2A2A0A5A6 115 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 LRP3O75074 770 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 SIN3BO75182 1162 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 RHOBTB1O94844 696 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 CR2P20023 1033 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 GGCXP38435 758 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 CTSOP43234 321 aaPredicted RBP11.65□□□□□ -0.54
SNHG3-202ENST00000437681 CCR5P51681 352 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 MMRN1Q13201 1228 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 MYLK3Q32MK0 819 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 SLC45A4Q5BKX6 768 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 MARC1Q5VT66 337 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 FBXO38Q6PIJ6 1188 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 BRAT1Q6PJG6 821 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 SYT10Q6XYQ8 523 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 ACTRT1Q8TDG2 376 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 CYB5D2Q8WUJ1 264 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 TFB1MQ8WVM0 346 aaKnown RBP11.65□□□□□ -0.54
SNHG3-202ENST00000437681 ALG3Q92685 438 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 MRGPRX1Q96LB2 322 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 TLR10Q9BXR5 811 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 MAGEB5Q9BZ81 275 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 PREBQ9HCU5 417 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 LZTFL1Q9NQ48 299 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 ETNK2Q9NVF9 386 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 PCDHGA5Q9Y5G8 931 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 TOR1BO14657 336 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 SNAP91O60641 907 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 CST8O60676 142 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 STK10O94804 968 aaKnown RBP11.65□□□□□ -0.54
SNHG3-202ENST00000437681 DNTTP04053 509 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 KRT10P13645 584 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 CHRNA3P32297 505 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 EMC10Q5UCC4 262 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 DAB2IPQ5VWQ8 1189 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 PEAR1Q5VY43 1037 aaPredicted RBP11.65□□□□□ -0.54
SNHG3-202ENST00000437681 PAPD7Q5XG87 772 aaKnown RBP11.65□□□□□ -0.54
SNHG3-202ENST00000437681 SRLQ86TD4 932 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 NKD2Q969F2 451 aaPredicted RBP11.65□□□□□ -0.54
SNHG3-202ENST00000437681 TADA1Q96BN2 335 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 DUSP15Q9H1R2 295 aaPredicted RBP11.65□□□□□ -0.54
SNHG3-202ENST00000437681 TFR2Q9UP52 801 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 PPIL1Q9Y3C6 166 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 HYOU1Q9Y4L1 999 aa11.65□□□□□ -0.54
SNHG3-202ENST00000437681 FAM86C2PA6NEL3 165 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 TTC34A8MYJ7 566 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 DFFAO00273 331 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 PSMD3O43242 534 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 PYGMP11217 842 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 COL9A1P20849 921 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 STIP1P31948 543 aaKnown RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 MMP13P45452 471 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 CSTF1Q05048 431 aaKnown RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 CST6Q15828 149 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 CPNE8Q86YQ8 564 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 SLC13A5Q86YT5 568 aaPredicted RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 C10orf67Q8IYJ2 551 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 C12orf50Q8NA57 414 aaPredicted RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 RNF25Q96BH1 459 aaPredicted RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 POLR1EQ9GZS1 481 aaKnown RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 EML5Q05BV3 1969 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 RNGTTO60942 597 aaKnown RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 ACADMP11310 421 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 NDUFV2P19404 249 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 CASQ1P31415 396 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 RHOAP61586 193 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 POLR2LP62875 67 aaKnown RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 LMNB2Q03252 620 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 AGERQ15109 404 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 CCNG2Q16589 344 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 SFTPA1Q8IWL2 248 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 CCDC33Q8N5R6 958 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 GPR161Q8N6U8 529 aaKnown RBP11.64□□□□□ -0.55
SNHG3-202ENST00000437681 PRSS33Q8NF86 280 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 FOXJ1Q92949 421 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 LRRC45Q96CN5 670 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 ECHDC3Q96DC8 303 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 ACOX2Q99424 681 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 ATP13A3Q9H7F0 1226 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 VPS45Q9NRW7 570 aa11.64□□□□□ -0.55
SNHG3-202ENST00000437681 MYO1CO00159 1063 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 HTRA2O43464 458 aaPredicted RBP11.63□□□□□ -0.55
SNHG3-202ENST00000437681 FTCDO95954 541 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 CCNB1P14635 433 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 GJC1P36383 396 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
SNHG3-202ENST00000437681 ZNF235Q14590 738 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 ZNF805Q5CZA5 627 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 ITPRIPL1Q6GPH6 555 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 NCEH1Q6PIU2 408 aa11.63□□□□□ -0.55
SNHG3-202ENST00000437681 TRIM69Q86WT6 500 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms