RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 VEPH1Q14D04 833 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 FASTKD1Q53R41 847 aaKnown RBP26.02■■□□□ 1.76
CPNE1-216ENST00000437340 CMTR2Q8IYT2 770 aaKnown RBP26.02■■□□□ 1.76
CPNE1-216ENST00000437340 RFWD2Q8NHY2 731 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 GPR22Q99680 433 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 RASSF9O75901 435 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 DLDP09622 509 aaKnown RBP26.02■■□□□ 1.76
CPNE1-216ENST00000437340 SLC6A4P31645 630 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 ARFIP2P53365 341 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 TTC31Q49AM3 519 aaPredicted RBP26.02■■□□□ 1.76
CPNE1-216ENST00000437340 PPM1JQ5JR12 505 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 ESRP1Q6NXG1 681 aaKnown RBP26.02■■□□□ 1.76
CPNE1-216ENST00000437340 CCDC91Q7Z6B0 441 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 ZC3HC1Q86WB0 502 aaKnown RBP26.02■■□□□ 1.76
CPNE1-216ENST00000437340 ARRDC2Q8TBH0 407 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 TXLNGQ9NUQ3 528 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 SPG21Q9NZD8 308 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 DCTN4Q9UJW0 460 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 MAFFQ9ULX9 164 aa26.02■■□□□ 1.76
CPNE1-216ENST00000437340 SYN1P17600 705 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 ACVRL1P37023 503 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 SERPINH1P50454 418 aaKnown RBP26.01■■□□□ 1.75
CPNE1-216ENST00000437340 CSRP3P50461 194 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 MAXP61244 160 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 BTG3Q14201 252 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-216ENST00000437340 TAF12Q16514 161 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 PCSK7Q16549 785 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 C16orf46Q6P387 395 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 CMC1Q7Z7K0 106 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 CLEC14AQ86T13 490 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 DDX53Q86TM3 631 aaKnown RBP26.01■■□□□ 1.75
CPNE1-216ENST00000437340 POLR1EQ9GZS1 481 aaKnown RBP26.01■■□□□ 1.75
CPNE1-216ENST00000437340 KCNK13Q9HB14 408 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 PDFQ9HBH1 243 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 SLC40A1Q9NP59 571 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 THAP1Q9NVV9 213 aa26.01■■□□□ 1.75
CPNE1-216ENST00000437340 ZBBXA8MT70 800 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 UNC5CO95185 931 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 VAPBO95292 243 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 PAPSS2O95340 614 aaPredicted RBP26■■□□□ 1.75
CPNE1-216ENST00000437340 URODP06132 367 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 DSC2Q02487 901 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 STX3Q13277 289 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 LCA5Q86VQ0 697 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 FAM167BQ9BTA0 163 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 ATXN3LQ9H3M9 355 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 A0A096LPK6 155 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 A0A0G2JND7 137 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 CLDN11O75508 207 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 FGBP02675 491 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 PRKCGP05129 697 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 ARNTP27540 789 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 CHRNA4P43681 627 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 MBLAC2Q68D91 279 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 RFWD3Q6PCD5 774 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 CRLF3Q8IUI8 442 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 GPR65Q8IYL9 337 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 PGBD5Q8N414 524 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 ATXN7L3BQ96GX2 97 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 TMEM216Q9P0N5 145 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 ANKRD6Q9Y2G4 727 aa26■■□□□ 1.75
CPNE1-216ENST00000437340 ZFP37Q9Y6Q3 630 aaPredicted RBP26■■□□□ 1.75
CPNE1-216ENST00000437340 GOLGA8TH3BQL2 631 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 STC2O76061 302 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 DNAJB1P25685 340 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 GNA12Q03113 381 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 MSLNQ13421 630 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-216ENST00000437340 THOC5Q13769 683 aaKnown RBP25.99■■□□□ 1.75
CPNE1-216ENST00000437340 PCLAFQ15004 111 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 CNGA3Q16281 694 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 ALG1LQ6GMV1 187 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 CHST9Q7L1S5 443 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 BBS5Q8N3I7 341 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 PPP1R14CQ8TAE6 165 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 GABPB2Q8TAK5 448 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-216ENST00000437340 KCNK4Q9NYG8 393 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 COPG2Q9UBF2 871 aa25.99■■□□□ 1.75
CPNE1-216ENST00000437340 UXTQ9UBK9 157 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-216ENST00000437340 CCDC195A0A1B0GUA6 201 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 LOC285095A0A1B0GVY8 99 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 CCDC78A2IDD5 438 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 H3BNC9 293 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 DNAJC6O75061 913 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 C2P06681 752 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 ZNF235Q14590 738 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 GRM3Q14832 879 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 TMEM240Q5SV17 173 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 CES4AQ5XG92 561 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 FBXW10Q5XX13 1052 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 KIAA0408Q6ZU52 694 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 KDELC2Q7Z4H8 507 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 DENND1CQ8IV53 801 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 TCEAL8Q8IYN2 117 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 CFAP52Q8N1V2 620 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 SLC25A41Q8N5S1 370 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 TMEM120AQ9BXJ8 343 aa25.98■■□□□ 1.75
CPNE1-216ENST00000437340 KLF16Q9BXK1 252 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-216ENST00000437340 EPOP01588 193 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 AHSGP02765 367 aa25.97■■□□□ 1.75
CPNE1-216ENST00000437340 FGF3P11487 239 aaPredicted RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms