RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 CLEC14AQ86T13 490 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 PARGQ86W56 976 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 WDTC1Q8N5D0 677 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 ATP11CQ8NB49 1132 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 KCNE4Q8WWG9 221 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 CASKIN2Q8WXE0 1202 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 SHC3Q92529 594 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 TMEM159Q96B96 161 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 MED8Q96G25 268 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 BMFQ96LC9 184 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 NPY6RQ99463 290 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 SEMA3CQ99985 751 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 HEPHQ9BQS7 1158 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 OSBPL1AQ9BXW6 950 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 FAM204AQ9H8W3 233 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 ASCL3Q9NQ33 180 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 APEX2Q9UBZ4 518 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 IL36AQ9UHA7 158 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 XPO7Q9UIA9 1087 aaKnown RBP8.46□□□□□ -1.06
CDH13-203ENST00000431540 HS3ST4Q9Y661 456 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 NAV2Q8IVL1 2488 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 PIEZO2Q9H5I5 2752 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 AHCTF1Q8WYP5 2266 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 LRRK1Q38SD2 2015 aa8.46□□□□□ -1.06
CDH13-203ENST00000431540 TENM4Q6N022 2769 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 ZSCAN5CA6NGD5 496 aaPredicted RBP8.45□□□□□ -1.06
CDH13-203ENST00000431540 CDRT15L2A8MXV6 281 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 K7ENP7 123 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 M0QYT0 321 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 CBX4O00257 560 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 FPGTO14772 594 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 SLC31A1O15431 190 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 THAP12O43422 761 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 USP12O75317 370 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 DAB1O75553 588 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 ENDOD1O94919 500 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 PCDH8O95206 1070 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 KRT5P13647 590 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 MAT2AP31153 395 aaKnown RBP8.45□□□□□ -1.06
CDH13-203ENST00000431540 KRT9P35527 623 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 CXADRP78310 365 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 SGCGQ13326 291 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 MORC3Q14149 939 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 SLC25A52Q3SY17 297 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 TAF1BQ53T94 588 aaPredicted RBP8.45□□□□□ -1.06
CDH13-203ENST00000431540 CARD16Q5EG05 197 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 DENND1BQ6P3S1 775 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 INO80CQ6PI98 192 aaPredicted RBP8.45□□□□□ -1.06
CDH13-203ENST00000431540 TRIM65Q6PJ69 517 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 OLFML1Q6UWY5 402 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 KDM7AQ6ZMT4 941 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 GBP6Q6ZN66 633 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 Q6ZSR6 202 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 Q6ZVU0 165 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 BNIPLQ7Z465 357 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 MARCH9Q86YJ5 346 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 ZNF683Q8IZ20 524 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 MSANTD4Q8NCY6 345 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 WDR36Q8NI36 951 aaKnown RBP8.45□□□□□ -1.06
CDH13-203ENST00000431540 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
CDH13-203ENST00000431540 TTC9Q92623 222 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 IL12RB2Q99665 862 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 BOCQ9BWV1 1114 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 C1QTNF7Q9BXJ2 289 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 INTS2Q9H0H0 1204 aaKnown RBP8.45□□□□□ -1.06
CDH13-203ENST00000431540 MUC3BQ9H195 1237 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 DONSONQ9NYP3 566 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDH13-203ENST00000431540 SPASTQ9UBP0 616 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 VANGL2Q9ULK5 521 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 PCDHGA7Q9Y5G6 932 aa8.45□□□□□ -1.06
CDH13-203ENST00000431540 CFAP69A5D8W1 941 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 TRIM49BA6NDI0 452 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 LMO7DNF2Z398 122 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 PIK3R2O00459 728 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 KPNA3O00505 521 aaPredicted RBP8.44□□□□□ -1.06
CDH13-203ENST00000431540 AQP9O43315 295 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 CSO75390 466 aaKnown RBP8.44□□□□□ -1.06
CDH13-203ENST00000431540 POP4O95707 220 aaKnown RBP8.44□□□□□ -1.06
CDH13-203ENST00000431540 ITGB2P05107 769 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 CTSLP07711 333 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 RHOCP08134 193 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 ITGA2BP08514 1039 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 ADRB3P13945 408 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 VAV1P15498 845 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 PNLIPP16233 465 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 OR1E1P30953 314 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 PFN3P60673 137 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 GABREP78334 506 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 RAD51Q06609 339 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 CCDC173Q0VFZ6 552 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 PAK1Q13153 545 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 FZD2Q14332 565 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 GRM3Q14832 879 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 AGERQ15109 404 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 CLPPQ16740 277 aaPredicted RBP8.44□□□□□ -1.06
CDH13-203ENST00000431540 ARL13BQ3SXY8 428 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 PCSK4Q6UW60 755 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 GCNT7Q6ZNI0 430 aa8.44□□□□□ -1.06
CDH13-203ENST00000431540 RBM44Q6ZP01 1051 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms