RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MPP3Q13368 585 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 DMC1Q14565 340 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 DNAJC21Q5F1R6 531 aaKnown RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 LEKR1Q6ZMV7 388 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 METTL3Q86U44 580 aaKnown RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 PGBD5Q8N414 524 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ATOH1Q92858 354 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 LRRC39Q96DD0 335 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 OXNAD1Q96HP4 312 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 TTC25Q96NG3 672 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 FAM83CQ9BQN1 747 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 MGME1Q9BQP7 344 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 SEMA4AQ9H3S1 761 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 VPS45Q9NRW7 570 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ABCB8Q9NUT2 735 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 FBXO10Q9UK96 956 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 AP3B1O00203 1094 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 CD160O95971 181 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 ITKQ08881 620 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 PITRM1Q5JRX3 1037 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 CFAP58Q5T655 872 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 ALS2CLQ60I27 953 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 TRIM68Q6AZZ1 485 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 NAPEPLDQ6IQ20 393 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 KIAA0907Q7Z7F0 614 aaPredicted RBP18.5■□□□□ 0.55
HMGN1-206ENST00000431390 LINC00523Q86TU6 105 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 XPO6Q96QU8 1125 aaKnown RBP18.5■□□□□ 0.55
HMGN1-206ENST00000431390 ACBD3Q9H3P7 528 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 GGA2Q9UJY4 613 aa18.5■□□□□ 0.55
HMGN1-206ENST00000431390 INTS6Q9UL03 887 aaKnown RBP18.5■□□□□ 0.55
HMGN1-206ENST00000431390 H0Y858 1186 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 RIPK2O43353 540 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 TTC4O95801 387 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 PABPC1P11940 636 aaKnown RBP18.49■□□□□ 0.55
HMGN1-206ENST00000431390 CES1P23141 567 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 NUMBP49757 651 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 MAXP61244 160 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 SLC20A2Q08357 652 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 CYTH1Q15438 398 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 SLC14A2Q15849 920 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 BBS9Q3SYG4 887 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 MSS51Q4VC12 460 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 MTSS1LQ765P7 747 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 ZBED8Q8IZ13 594 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 IQCKQ8N0W5 287 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 SPATA22Q8NHS9 363 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 ARRDC2Q8TBH0 407 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 TADA1Q96BN2 335 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 EPB41L4BQ9H329 900 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 NINJ2Q9NZG7 142 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 EPS15L1Q9UBC2 864 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 MIA3Q5JRA6 1907 aa18.49■□□□□ 0.55
HMGN1-206ENST00000431390 ECI2O75521 394 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 TMCC1O94876 653 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 MT-CYBP00156 380 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-206ENST00000431390 ARSAP15289 507 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 PSMC3P17980 439 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 GRIA1P42261 906 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 SULT2A1Q06520 285 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 NIPAL4Q0D2K0 466 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 FUT11Q495W5 492 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 CCDC38Q502W7 563 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 DENND2CQ68D51 928 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 ASTLQ6HA08 431 aaPredicted RBP18.48■□□□□ 0.55
HMGN1-206ENST00000431390 LINGO4Q6UY18 593 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 PRPF39Q86UA1 669 aaKnown RBP18.48■□□□□ 0.55
HMGN1-206ENST00000431390 YAF2Q8IY57 180 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 C9orf72Q96LT7 481 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 EBF3Q9H4W6 596 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 CASS4Q9NQ75 786 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 UBP1Q9NZI7 540 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 ACTL7AQ9Y615 435 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 TEX264Q9Y6I9 313 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 CFAP54Q96N23 3096 aa18.48■□□□□ 0.55
HMGN1-206ENST00000431390 CACNA1HO95180 2353 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 MUSKO15146 869 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 MMP2P08253 660 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 NUDT17P0C025 328 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 TSHRP16473 764 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 CR2P20023 1033 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 SERPINH1P50454 418 aaKnown RBP18.47■□□□□ 0.55
HMGN1-206ENST00000431390 DSC2Q02487 901 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 NSUN2Q08J23 767 aaKnown RBP eCLIP18.47■□□□□ 0.55
HMGN1-206ENST00000431390 SPARCL1Q14515 664 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 FASTKD3Q14CZ7 662 aaKnown RBP18.47■□□□□ 0.55
HMGN1-206ENST00000431390 KYNUQ16719 465 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 KDELC1Q6UW63 502 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 PARM1Q6UWI2 310 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 AHI1Q8N157 1196 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 PYROXD1Q8WU10 500 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 ZFYVE19Q96K21 471 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 SEMA3CQ99985 751 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 ECT2Q9H8V3 914 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 HPS4Q9NQG7 708 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 AVILO75366 819 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 ABHD2P08910 425 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 ADRA1AP35348 466 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 CD86P42081 329 aa18.47■□□□□ 0.55
HMGN1-206ENST00000431390 SKOR1P84550 965 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms