RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 IRF7Q92985 503 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 MYO19Q96H55 970 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 PNKPQ96T60 521 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 TEX12Q9BXU0 123 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 FAM83EQ2M2I3 478 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 RAET1GQ6H3X3 334 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 HAPLN3Q96S86 360 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 YIPF3Q9GZM5 350 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 PIH1D1Q9NWS0 290 aaKnown RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 C6orf203Q9P0P8 240 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 PNMA8BQ9ULN7 279 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 LEFTY2O00292 366 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 GPR1P46091 355 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 ADGRF1Q5T601 910 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 VMP1Q96GC9 406 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 PRMT1Q99873 361 aaKnown RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 COG5Q9UP83 839 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 LZTS1Q9Y250 596 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 HMOX2P30519 316 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 BTKQ06187 659 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 FUT8Q9BYC5 575 aa13.08□□□□□ -0.32
PTCH1-207ENST00000429896 ROPN1BQ9BZX4 212 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 ROPN1Q9HAT0 212 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-207ENST00000429896 LCA5LO95447 670 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 MYL2P10916 166 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 SOAT1P35610 550 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 MGAT5Q09328 741 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 STRA8Q7Z7C7 330 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 OR6K2Q8NGY2 324 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 ZNF212Q9UDV6 495 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 SNX10Q9Y5X0 201 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 MYH6P13533 1939 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 AGTP01019 485 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 TDHQ8IZJ6 230 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 SHCBP1LQ9BZQ2 653 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 SMOC2Q9H3U7 446 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 WWOXQ9NZC7 414 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 PDE2AO00408 941 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-207ENST00000429896 DCTN3O75935 186 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 CNPP09543 421 aaKnown RBP13.07□□□□□ -0.32
PTCH1-207ENST00000429896 SERPINB8P50452 374 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 TBL3Q12788 808 aaKnown RBP13.07□□□□□ -0.32
PTCH1-207ENST00000429896 GRM2Q14416 872 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 PYROXD2Q8N2H3 581 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 RIBC1Q8N443 379 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-207ENST00000429896 ALLCQ8N6M5 410 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 HSD3B7Q9H2F3 369 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
PTCH1-207ENST00000429896 ITGAVP06756 1048 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 CDK18Q07002 472 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 LRRC32Q14392 662 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 DSC3Q14574 896 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 PCID2Q5JVF3 399 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 PDPK2PQ6A1A2 396 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 HERVK_113Q902F9 699 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 TMEM159Q96B96 161 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 ASPSCR1Q9BZE9 553 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 ECM29Q5VYK3 1845 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 TULP2O00295 520 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 CHADO15335 359 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 USP12O75317 370 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 H2AFYO75367 372 aaKnown RBP13.07□□□□□ -0.32
PTCH1-207ENST00000429896 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
PTCH1-207ENST00000429896 HIC1Q14526 733 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 AGAP9Q5VTM2 703 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 LINGO4Q6UY18 593 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 ZSCAN32Q9NX65 697 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 LNPEPQ9UIQ6 1025 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 CD207Q9UJ71 328 aa13.07□□□□□ -0.32
PTCH1-207ENST00000429896 TMEM189-UBE2V1I3L0A0 370 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 MFSD11O43934 449 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 HOXB8P17481 243 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-207ENST00000429896 HTR1BP28222 390 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 PPP2R2AP63151 447 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 KCNMB4Q86W47 210 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 LRRC6Q86X45 466 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 ICA1LQ8NDH6 482 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 OR7D4Q8NG98 312 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 HMCESQ96FZ2 354 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 TRIM33Q9UPN9 1127 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 WNT6Q9Y6F9 365 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 C1orf232A0A0U1RR37 186 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 KRT72Q14CN4 511 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 HIST2H2ACQ16777 129 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-207ENST00000429896 HIST2H2AA3Q6FI13 130 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 FAM136AQ96C01 138 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 MYCBPQ99417 103 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-207ENST00000429896 TRIM43BA6NCK2 446 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
PTCH1-207ENST00000429896 CTPS1P17812 591 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 CCNCP24863 283 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 HALP42357 657 aa13.06□□□□□ -0.32
PTCH1-207ENST00000429896 LRRN4Q8WUT4 740 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms