RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ANP32CO43423 234 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 CNTN5O94779 1100 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3HP0C7X1 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 CYP3A7P24462 503 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 PRKCHP24723 683 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC37A1P57057 533 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SNX16P57768 344 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 B4GALNT1Q00973 533 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 CDK18Q07002 472 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SRSF1Q07955 248 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 LAMB3Q13751 1172 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 CAMK1Q14012 370 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 RILPL1Q5EBL4 403 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3GQ6DHY5 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TTLL5Q6EMB2 1281 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3CQ6IPX1 549 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC30A6Q6NXT4 461 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF474Q6S9Z5 364 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 DENND5BQ6ZUT9 1274 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 IKBIPQ70UQ0 350 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 RNF144BQ7Z419 303 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 ADGRG6Q86SQ4 1221 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 RHPN2Q8IUC4 686 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TBC1D3Q8IZP1 549 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SRBD1Q8N5C6 995 aaKnown RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 NANOGP1Q8N7R0 232 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 RFWD2Q8NHY2 731 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 MPLKIPQ8TAP9 179 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 KIF1BPQ96EK5 621 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 WDFY2Q96P53 400 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 GPR78Q96P69 363 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TRMOQ9BU70 441 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 HTATIP2Q9BUP3 242 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 HEMGNQ9BXL5 484 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 FTOQ9C0B1 505 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 RANBP17Q9H2T7 1088 aaKnown RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SCPEP1Q9HB40 452 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 PDE11AQ9HCR9 933 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC22A11Q9NSA0 550 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TMLHEQ9NVH6 421 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 THAP1Q9NVV9 213 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 TMEM45AQ9NWC5 275 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 MTMR4Q9NYA4 1195 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 WWOXQ9NZC7 414 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 CD207Q9UJ71 328 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 BAG5Q9UL15 447 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 CORO1CQ9ULV4 474 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SLC8A2Q9UPR5 921 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF711Q9Y462 761 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 SNX8Q9Y5X2 465 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 COPG1Q9Y678 874 aaKnown RBP3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 RUSC2Q8N2Y8 1516 aa3.17□□□□□ -1.9
HMGB1P9-201ENST00000429856 PTGES3LE9PB15 166 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 SNAP23O00161 211 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ADAM10O14672 748 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 PER2O15055 1255 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 PRPF4O43172 522 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 SEPT4O43236 478 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 HNRNPRO43390 633 aaKnown RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ADAM20O43506 726 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 TULP3O75386 442 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 BEST1O76090 585 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 TMEM191BP0C7N4 346 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 RFPL3SP0C7P2 107 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 CSH1P0DML2 217 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 CSH2P0DML3 217 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 HSPA1AP0DMV8 641 aaKnown RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 HSPA1BP0DMV9 641 aaKnown RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 SNHG28P0DPA3 235 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 RARGP13631 454 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 PRPH2P23942 346 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 HOXD9P28356 352 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ARL3P36405 182 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 PCP4P48539 62 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 PPP5CP53041 499 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 MVDP53602 400 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 POLGP54098 1239 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 CDH15P55291 814 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 UFM1P61960 85 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 CEBPZQ03701 1054 aaKnown RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 MAMLD1Q13495 774 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 IRF3Q14653 427 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 NAA25Q14CX7 972 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 RBMS2Q15434 407 aaKnown RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 TWIST1Q15672 202 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 FBXO43Q4G163 708 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ISM2Q6H9L7 571 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 LRIG3Q6UXM1 1119 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 FAM47EQ6ZV65 393 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ADGRF4Q8IZF3 695 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 SCML4Q8N228 414 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 OR52N4Q8NGI2 321 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 C2CD4CQ8TF44 421 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 KCNJ9Q92806 393 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 HMCESQ96FZ2 354 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 CLMNQ96JQ2 1002 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZFYVE19Q96K21 471 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 ZNF48Q96MX3 618 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 YME1L1Q96TA2 773 aa3.16□□□□□ -1.9
HMGB1P9-201ENST00000429856 NPAS1Q99742 590 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms