RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ANKRD63C9JTQ0 380 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 EML1O00423 815 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 OTCP00480 354 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 ADH1AP07327 375 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 GSTM5P46439 218 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 SPIRE1Q08AE8 756 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 TCHHL1Q5QJ38 904 aaPredicted RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 FAM220AQ7Z4H9 259 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 LRRC19Q9H756 370 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 DAPK2Q9UIK4 370 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 OR6C75A6NL08 312 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 LIASO43766 372 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 DDNO94850 711 aaPredicted RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 SNRPB2P08579 225 aaKnown RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 RFX4Q33E94 735 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 BBS12Q6ZW61 710 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 BNIPLQ7Z465 357 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 CROCCP3Q8IVE0 287 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 ADAM32Q8TC27 787 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 TIFAQ96CG3 184 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 C1orf50Q9BV19 199 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 MSRAQ9UJ68 235 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 F8VP50 259 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 ACSL4O60488 711 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 CCNB1P14635 433 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 GLRA2P23416 452 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 HTR1BP28222 390 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 CASP7P55210 303 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 CSNK2BP67870 215 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 NOMO2Q5JPE7 1267 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 NET1Q7Z628 596 aaPredicted RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 CREG2Q8IUH2 290 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 TOP6BLQ8N6T0 577 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 SCAIQ8N9R8 606 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 FNIP1Q8TF40 1166 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 TRAPPC12Q8WVT3 735 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 NMD3Q96D46 503 aaKnown RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 ZNF184Q99676 751 aaPredicted RBP12.92□□□□□ -0.34
LDB3-205ENST00000429277 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
LDB3-205ENST00000429277 ULK1O75385 1050 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 FGF1P05230 155 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 PSMB4P28070 264 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CNTN2Q02246 1040 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 PTSQ03393 145 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 USP41Q3LFD5 358 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 WSCD1Q658N2 575 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 MZT2BQ6NZ67 158 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 MREGQ8N565 214 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CXorf40BQ96DE9 158 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SMAD5Q99717 465 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 MYLK2Q9H1R3 596 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CHST7Q9NS84 486 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 LINC00854A0A1B0GVQ3 168 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CLK2P49760 499 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 SCNN1GP51170 649 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 FKBP1BP68106 108 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 TRIM25Q14258 630 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 GJC2Q5T442 439 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 POTEHQ6S545 545 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 NELL1Q92832 810 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 TRMOQ9BU70 441 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CNGB3Q9NQW8 809 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 COL1A2P08123 1366 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 OR6B1O95007 311 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 IL12RB1P42701 662 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 CRYBB1P53674 252 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 SULT2A1Q06520 285 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 RGS1Q08116 209 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 ZSWIM2Q8NEG5 633 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SNRNP27Q8WVK2 155 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 FAM124BQ9H5Z6 455 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 CCNDBP1O95273 360 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 AMD1P17707 334 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 HDCP19113 662 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 ATP12AP54707 1039 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 MAPKAPK3Q16644 382 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 PFKFB4Q16877 469 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 LSM12Q3MHD2 195 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 ANXA8L1Q5VT79 327 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 RNF43Q68DV7 783 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 YTHDF3Q7Z739 585 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 PTGR2Q8N8N7 351 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 RP9Q8TA86 221 aaKnown RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 MYDGFQ969H8 173 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 FHDC1Q9C0D6 1143 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 ALG9Q9H6U8 611 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SEMA4BQ9NPR2 832 aaPredicted RBP12.91□□□□□ -0.34
LDB3-205ENST00000429277 CLN6Q9NWW5 311 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SPATA2Q9UM82 520 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SLC9A8Q9Y2E8 581 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 RAP2CQ9Y3L5 183 aa12.91□□□□□ -0.34
LDB3-205ENST00000429277 SNPHO15079 494 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms