RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 AP1G1O43747 822 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 SRGAP2O75044 1071 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 ZNF821O75541 412 aaPredicted RBP18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 SERPINH1P50454 418 aaKnown RBP18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 CCNHP51946 323 aaPredicted RBP18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 PTK2Q05397 1052 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 CARD16Q5EG05 197 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 TPRG1LQ5T0D9 272 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 INO80CQ6PI98 192 aaPredicted RBP18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 CREBRFQ8IUR6 639 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 SHC3Q92529 594 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 MED8Q96G25 268 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 CLMPQ9H6B4 373 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 SYNDIG1Q9H7V2 258 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 ATP13A1Q9HD20 1204 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 PLCB1Q9NQ66 1216 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 TMPRSS4Q9NRS4 437 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 APEX2Q9UBZ4 518 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 SSUH2Q9Y2M2 353 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 PTPN13Q12923 2485 aa18.65■□□□□ 0.58
UPK3BP1-201ENST00000428678 ILVBLA1L0T0 632 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 NEMP1O14524 444 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 RIOK3O14730 519 aaKnown RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 SPINT1O43278 529 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 TCEA3O75764 348 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 FGFR1OPO95684 399 aaKnown RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 F9P00740 461 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 KRT10P13645 584 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 RPIAP49247 311 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 SKOR1P84550 965 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 EIF2B5Q13144 721 aaKnown RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 MORC3Q14149 939 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZSCAN23Q3MJ62 389 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 PERM1Q5SV97 790 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 GBP6Q6ZN66 633 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 CCDC81Q6ZN84 652 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZSCAN30Q86W11 494 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 RBFAQ8N0V3 343 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 ARL14Q8N4G2 192 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 BTN2A2Q8WVV5 523 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 GLMNQ92990 594 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 PRR11Q96HE9 360 aaPredicted RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 LENG8Q96PV6 779 aaPredicted RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 TBCBQ99426 244 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 KLF6Q99612 283 aaPredicted RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 C1QTNF2Q9BXJ5 285 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 TM6SF2Q9BZW4 377 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 SPASTQ9UBP0 616 aa18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 APOBEC3BQ9UH17 382 aaKnown RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 FCF1Q9Y324 198 aaKnown RBP18.64■□□□□ 0.57
UPK3BP1-201ENST00000428678 IGLV3-10A0A075B6K4 115 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 CDRT15L2A8MXV6 281 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 TPP1O14773 563 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 TSPAN6O43657 245 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 SLC28A2O43868 658 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZMPSTE24O75844 475 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 TNFSF15O95150 251 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 THOP1P52888 689 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 SLC20A2Q08357 652 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 C1orf61Q13536 156 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 PRRT3Q5FWE3 981 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZNF783Q6ZMS7 281 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZDHHC17Q8IUH5 632 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 SLC35F3Q8IY50 421 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 DRC7Q8IY82 874 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 ELOA2Q8IYF1 753 aaPredicted RBP18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 RYBPQ8N488 228 aaPredicted RBP18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 WDR36Q8NI36 951 aaKnown RBP18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 NAT6Q93015 286 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 PGAP3Q96FM1 320 aaPredicted RBP18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 C1orf74Q96LT6 269 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 TCEAL2Q9H3H9 227 aaPredicted RBP18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 GGT7Q9UJ14 662 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 ITM2BQ9Y287 266 aa18.63■□□□□ 0.57
UPK3BP1-201ENST00000428678 FAM170AA1A519 330 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 GCATO75600 419 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 ABL2P42684 1182 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 ADKP55263 362 aaKnown RBP18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 PFN3P60673 137 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 ARF5P84085 180 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 GNA12Q03113 381 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 KCNC4Q03721 635 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 CLN3Q13286 438 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 EXOC3L4Q17RC7 722 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 SLC25A52Q3SY17 297 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 ACBD5Q5T8D3 534 aaPredicted RBP18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 FAM102AQ5T9C2 384 aaPredicted RBP18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 SLC47A2Q86VL8 602 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 DENND6BQ8NEG7 585 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 OR6K2Q8NGY2 324 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 NT5C3BQ969T7 300 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 BOCQ9BWV1 1114 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 ACTL7AQ9Y615 435 aa18.62■□□□□ 0.57
UPK3BP1-201ENST00000428678 CCDC187A0A096LP49 1063 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 C16orf96A6NNT2 1141 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 CASC3O15234 703 aaKnown RBP18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 ANXA6P08133 673 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 PNMA6AP0CW24 399 aaPredicted RBP18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 GKP32189 559 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms