RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 ZDHHC16Q969W1 377 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 PPP1R16AQ96I34 528 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 HS3ST6Q96QI5 342 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 PCDHB18PQ96TA0 734 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 KLF6Q99612 283 aaPredicted RBP10.23□□□□□ -0.77
GACAT3-201ENST00000426539 SLC17A9Q9BYT1 436 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 TM6SF2Q9BZW4 377 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 NUP62CLQ9H1M0 184 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 OR12D3Q9UGF7 316 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 KLF15Q9UIH9 416 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 CLCA2Q9UQC9 943 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 ITM2BQ9Y287 266 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 RAI2Q9Y5P3 530 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 HS3ST3A1Q9Y663 406 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 AK5Q9Y6K8 562 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 ITPR1Q14643 2758 aa10.23□□□□□ -0.77
GACAT3-201ENST00000426539 BAHCC1Q9P281 2608 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 IGLON5A6NGN9 336 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 A6NNZ2 444 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 K7ESM1 405 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 AP1G1O43747 822 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 BRINP1O60477 761 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 NEBLO76041 1014 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 LRIG2O94898 1065 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 CKMT1AP12532 417 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 UNGP13051 313 aaPredicted RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 RHOQP17081 205 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 ABCG1P45844 678 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 HDAC4P56524 1084 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 POLR2FP61218 127 aaKnown RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 RPS21P63220 83 aaKnown RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 DAB2P98082 770 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 E2F1Q01094 437 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 KRT31Q15323 416 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 CDO1Q16878 200 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 CDKAL1Q5VV42 579 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 KIAA1161Q6NSJ0 714 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 KYAT3Q6YP21 454 aaKnown RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 LEKR1Q6ZMV7 388 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 TMC6Q7Z403 805 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 PTAR1Q7Z6K3 402 aaPredicted RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 ZNF677Q86XU0 584 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 CCDC185Q8N715 623 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 MSANTD4Q8NCY6 345 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 SNIP1Q8TAD8 396 aaKnown RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 ENOX1Q8TC92 643 aaKnown RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 CENPIQ92674 756 aaPredicted RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 ISG20Q96AZ6 181 aaKnown RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 IFT43Q96FT9 208 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 APOLD1Q96LR9 279 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 C11orf70Q9BRQ4 267 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 C1QTNF2Q9BXJ5 285 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 OSBPL2Q9H1P3 480 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 VPS16Q9H269 839 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 PRORYQ9H606 182 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 NOL6Q9H6R4 1146 aaKnown RBP10.22□□□□□ -0.77
GACAT3-201ENST00000426539 ZDHHC6Q9H6R6 413 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 TMEM248Q9NWD8 314 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 NLGN3Q9NZ94 848 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 DNAI1Q9UI46 699 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 SIK3Q9Y2K2 1263 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 PCDHB1Q9Y5F3 818 aa10.22□□□□□ -0.77
GACAT3-201ENST00000426539 SPTY2D1-AS1A0A0U1RR47 76 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 CXorf51AA0A1B0GTR3 108 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 TCRBV5S1A1TA0A578 114 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 C16orf96A6NNT2 1141 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 SCAMP1O15126 338 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 OPA1O60313 960 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 CSF2P04141 144 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 NME1P15531 152 aaKnown RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 SDC4P31431 198 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 RFC1P35251 1148 aaPredicted RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 SOX5P35711 763 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 PTPN9P43378 593 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 MAPKAPK2P49137 400 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 PFN3P60673 137 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 EIF2B5Q13144 721 aaKnown RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 CT47A1Q5JQC4 288 aaPredicted RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 ATXN7L2Q5T6C5 722 aaPredicted RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 RWDD4Q6NW29 188 aaKnown RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 STRADAQ7RTN6 431 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 DCP2Q8IU60 420 aaKnown RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 PYROXD2Q8N2H3 581 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 FAM181AQ8N9Y4 354 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 NETO2Q8NC67 525 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 ZNF548Q8NEK5 533 aaPredicted RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 FAM174AQ8TBP5 190 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 FEM1CQ96JP0 617 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 LENG8Q96PV6 779 aaPredicted RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 KLC2Q9H0B6 622 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 NLRC4Q9NPP4 1024 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 FAM207AQ9NSI2 230 aaPredicted RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 DNAJC28Q9NX36 388 aa10.21□□□□□ -0.77
GACAT3-201ENST00000426539 PNMA8BQ9ULN7 279 aaPredicted RBP10.21□□□□□ -0.77
GACAT3-201ENST00000426539 LOC400499M0QZD8 3231 aa10.21□□□□□ -0.78
GACAT3-201ENST00000426539 ASXL3Q9C0F0 2248 aa10.21□□□□□ -0.78
GACAT3-201ENST00000426539 FASNP49327 2511 aaKnown RBP10.21□□□□□ -0.78
GACAT3-201ENST00000426539 NBEAQ8NFP9 2946 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms