RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SGSM3Q96HU1 749 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 SEMA3CQ99985 751 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 FEM1AQ9BSK4 669 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 SPON2Q9BUD6 331 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 PRKD2Q9BZL6 878 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 MUC3BQ9H195 1237 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 HMX2A2RU54 273 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 H0Y626 953 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 UGT1A9O60656 530 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 CD160O95971 181 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 CR2P20023 1033 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 AVPR1AP37288 418 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 ARF5P84085 180 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 TEAD2Q15562 447 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 SLC1A5Q15758 541 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 MPPE1Q53F39 396 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 ARHGAP15Q53QZ3 475 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 INO80DQ53TQ3 878 aaPredicted RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 CES3Q6UWW8 571 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 LEKR1Q6ZMV7 388 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 C4orf33Q8N1A6 199 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 ZNF707Q96C28 371 aaPredicted RBP15.4■□□□□ 0.06
ACTB-204ENST00000425660 UGT1A7Q9HAW7 530 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 UGT1A10Q9HAW8 530 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 UGT1A8Q9HAW9 530 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 KCNK9Q9NPC2 374 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 BPTFQ12830 3046 aa15.4■□□□□ 0.06
ACTB-204ENST00000425660 CBX4O00257 560 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 PER2O15055 1255 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 CES1P23141 567 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 PPARDQ03181 441 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 SLC18A2Q05940 514 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 CDH18Q13634 790 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 CARNMT1Q8N4J0 409 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 BANPQ8N9N5 519 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 DCAF4L2Q8NA75 395 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 SH3RF2Q8TEC5 729 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 ZNF778Q96MU6 729 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 RANBP9Q96S59 729 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 PPANQ9NQ55 473 aaKnown RBP15.39■□□□□ 0.05
ACTB-204ENST00000425660 NKIRAS1Q9NYS0 192 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 ZFATQ9P243 1243 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 CCL26Q9Y258 94 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 TCAF1Q9Y4C2 921 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 ACTL7AQ9Y615 435 aa15.39■□□□□ 0.05
ACTB-204ENST00000425660 MT-ND3P03897 115 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 SERPINF2P08697 491 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 ATXN1LP0C7T5 689 aaKnown RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 ERVK-10P10266 1014 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 TCF3P15923 654 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 ADRA1DP25100 572 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 NMBRP28336 390 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 MZF1P28698 734 aaPredicted RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 CHRNA4P43681 627 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 DNAJC3Q13217 504 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 POU6F1Q14863 301 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 PCSK7Q16549 785 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 FYB2Q5VWT5 728 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 ELMSAN1Q6PJG2 1045 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 PACS1Q6VY07 963 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 TIFABQ6ZNK6 161 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 MFN1Q8IWA4 741 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 WFDC5Q8TCV5 224 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 DDI1Q8WTU0 396 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 USP13Q92995 863 aaPredicted RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 FEM1CQ96JP0 617 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 SERAC1Q96JX3 654 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 CPNE1Q99829 537 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 CINPQ9BW66 212 aaPredicted RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 SMG9Q9H0W8 520 aaKnown RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 TREX1Q9NSU2 369 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 TDP1Q9NUW8 608 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 GBF1Q92538 1859 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 CXorf51AA0A1B0GTR3 108 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 CCDC195A0A1B0GUA6 201 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 GMNCA6NCL1 334 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 TRIM49D1C9J1S8 452 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 RFPL1O75677 317 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 GJB3O75712 270 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 ASMTLO95671 621 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 PBX2P40425 430 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 SERPINH1P50454 418 aaKnown RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 SEC24CP53992 1094 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 CYTH1Q15438 398 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 TEDDM1Q5T9Z0 273 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 PDPK2PQ6A1A2 396 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 ADGRD2Q7Z7M1 963 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 PPHLN1Q8NEY8 458 aaKnown RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 FIBINQ8TAL6 211 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 RIN3Q8TB24 985 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 BCAS4Q8TDM0 211 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 ZNF317Q96PQ6 595 aaPredicted RBP15.38■□□□□ 0.05
ACTB-204ENST00000425660 MCMBPQ9BTE3 642 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 PBX4Q9BYU1 374 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 LMAN2LQ9H0V9 348 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 VPS28Q9UK41 221 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 PSAT1Q9Y617 370 aa15.38■□□□□ 0.05
ACTB-204ENST00000425660 MYO7AQ13402 2215 aa15.37■□□□□ 0.05
ACTB-204ENST00000425660 TTC24A2A3L6 582 aaPredicted RBP15.37■□□□□ 0.05
ACTB-204ENST00000425660 ZNF197O14709 1029 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms