RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TBX4P57082 545 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 DNM1Q05193 864 aaKnown RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 ABHD18Q0P651 414 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 ALCAMQ13740 583 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 NCOA4Q13772 614 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 DLG2Q15700 870 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 SMTNL2Q2TAL5 461 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 EDRF1Q3B7T1 1238 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 VWA2Q5GFL6 755 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 SNAP47Q5SQN1 464 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 TPRG1LQ5T0D9 272 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 DMRTA1Q5VZB9 504 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 JMJD6Q6NYC1 403 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 LVRNQ6Q4G3 990 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 TAF8Q7Z7C8 310 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 VPS36Q86VN1 386 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 UNC93AQ86WB7 457 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 SLITRK4Q8IW52 837 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 LGI2Q8N0V4 545 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 SIX6OS1Q8N1H7 587 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 CRYBG2Q8N1P7 616 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 FAM46DQ8NEK8 389 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 ERCC4Q92889 916 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 TSACCQ96A04 125 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 FAM131CQ96AQ9 280 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 HDAC11Q96DB2 347 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 PRICKLE1Q96MT3 831 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 TEFMQ96QE5 360 aaKnown RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 NT5C1AQ9BXI3 368 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 DUSP16Q9BY84 665 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 EDEM3Q9BZQ6 932 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 TM6SF1Q9BZW5 370 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 SDCBP2Q9H190 292 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 DPEP2Q9H4A9 486 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 LRRC4Q9HBW1 653 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 ACSS2Q9NR19 701 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 COPG2Q9UBF2 871 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 STOML2Q9UJZ1 356 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 CROTQ9UKG9 612 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 PILRAQ9UKJ1 303 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 CELSR1Q9NYQ6 3014 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 HIVEP1P15822 2718 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 ESPL1Q14674 2120 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 IGHV5-10-1A0A0J9YXX1 117 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 IGLON5A6NGN9 336 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 EIF3DO15371 548 aaKnown RBP eCLIP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ZG16O60844 167 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 STK17BO94768 372 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 CD2BP2O95400 341 aaKnown RBP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 STAU1O95793 577 aaKnown RBP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 FECHP22830 423 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 EIF4A3P38919 411 aaKnown RBP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 CCL11P51671 97 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 OR1D5P58170 312 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ZRSR2Q15696 482 aaKnown RBP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 TMEM259Q4ZIN3 620 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 CERCAMQ5T4B2 595 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ENPP7Q6UWV6 458 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 CEACAM20Q6UY09 585 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 MACC1Q6ZN28 852 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 TMEM135Q86UB9 458 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 CHSY1Q86X52 802 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 IQCKQ8N0W5 287 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 NXPE1Q8N323 547 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 CISD2Q8N5K1 135 aaKnown RBP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ESX1Q8N693 406 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ATP11CQ8NB49 1132 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 LRRN4CLQ8ND94 238 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 NDRG1Q92597 394 aaKnown RBP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ZDHHC16Q969W1 377 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 C19orf60Q96EN9 201 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 RNF31Q96EP0 1072 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 TBATAQ96M53 351 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 PPP1R9BQ96SB3 815 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 NUDT22Q9BRQ3 303 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 C1QTNF7Q9BXJ2 289 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 IRX2Q9BZI1 471 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ULBP1Q9BZM6 244 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 IMPG2Q9BZV3 1241 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 XYLT2Q9H1B5 865 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 GPR27Q9NS67 375 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ABCC13Q9NSE7 274 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 KLQ9UEF7 1012 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 VPS28Q9UK41 221 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 APPL1Q9UKG1 709 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 ZNF451Q9Y4E5 1061 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 USP3Q9Y6I4 520 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 RPS6KL1Q9Y6S9 549 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
SDCBP-203ENST00000424270 PCSK5Q92824 1860 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 A8MU76 341 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 PPP6R2O75170 966 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 ENDOD1O94919 500 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 CBX6O95503 412 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 TNFP01375 233 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 PNLIPP16233 465 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 ITGA3P26006 1051 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 STAT1P42224 750 aa6.43□□□□□ -1.38
SDCBP-203ENST00000424270 PIK3CAP42336 1068 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms