RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SP110Q9HB58 689 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 OSGEPQ9NPF4 335 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 CWC15Q9P013 229 aaKnown RBP11.13□□□□□ -0.63
USP49-204ENST00000423567 ACTL7AQ9Y615 435 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
USP49-204ENST00000423567 TMEM110-MUSTN1A8MSY1 372 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 IPO7O95373 1038 aaKnown RBP11.12□□□□□ -0.63
USP49-204ENST00000423567 IGHV4-34P06331 123 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 KRT7P08729 469 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 TCF4P15884 667 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 ITGB7P26010 798 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 MAN1A1P33908 653 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 CYLC1P35663 651 aaPredicted RBP11.12□□□□□ -0.63
USP49-204ENST00000423567 ARHGAP25P42331 645 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 GRIA4P48058 902 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 PAPOLAP51003 745 aaKnown RBP11.12□□□□□ -0.63
USP49-204ENST00000423567 NEK3P51956 506 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 METAP1P53582 386 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 CDH6P55285 790 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 C21orf59P57076 290 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 RACK1P63244 317 aaKnown RBP11.12□□□□□ -0.63
USP49-204ENST00000423567 FOXK2Q01167 660 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
USP49-204ENST00000423567 GRIK2Q13002 908 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 DPYSQ14117 519 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 SPA17Q15506 151 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 MYLK3Q32MK0 819 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 FBXL19Q6PCT2 694 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 POLNQ7Z5Q5 900 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 MAP7D3Q8IWC1 876 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 MINDY1Q8N5J2 469 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 TC2NQ8N9U0 490 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 KCTD6Q8NC69 237 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 SLC35G2Q8TBE7 412 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 FAM131CQ96AQ9 280 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 CSPG4P5Q96PW8 444 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 HDAC8Q9BY41 377 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 SLC39A8Q9C0K1 460 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 LRRC19Q9H756 370 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 PREBQ9HCU5 417 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 TM9SF3Q9HD45 589 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 FSCN3Q9NQT6 498 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 AASDHPPTQ9NRN7 309 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 RCOR3Q9P2K3 495 aaPredicted RBP11.12□□□□□ -0.63
USP49-204ENST00000423567 INTUQ9ULD6 942 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 RALGAPA1Q6GYQ0 2036 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 CFAP54Q96N23 3096 aa11.12□□□□□ -0.63
USP49-204ENST00000423567 FRYLO94915 3013 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 CDX4O14627 284 aaPredicted RBP11.11□□□□□ -0.63
USP49-204ENST00000423567 PRAMEF11O60813 436 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 PALMO75781 387 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 PCDH8O95206 1070 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 CER1O95813 267 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 UGT2B4P06133 528 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 AMPD1P23109 780 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 CSNK1EP49674 416 aaKnown RBP11.11□□□□□ -0.63
USP49-204ENST00000423567 MESDQ14696 234 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 RFTN1Q14699 578 aaPredicted RBP11.11□□□□□ -0.63
USP49-204ENST00000423567 GRM3Q14832 879 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 PDK2Q15119 407 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 SETMARQ53H47 684 aaPredicted RBP11.11□□□□□ -0.63
USP49-204ENST00000423567 ODF2Q5BJF6 829 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
USP49-204ENST00000423567 PIP5KL1Q5T9C9 394 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 NEK5Q6P3R8 708 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 TRIM69Q86WT6 500 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 GAS2L3Q86XJ1 694 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 CCDC170Q8IYT3 715 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 OR6K2Q8NGY2 324 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 C1orf216Q8TAB5 229 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 NSMCE1Q8WV22 266 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 RFFLQ8WZ73 363 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 ARRDC3Q96B67 414 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 SERAC1Q96JX3 654 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 CINPQ9BW66 212 aaPredicted RBP11.11□□□□□ -0.63
USP49-204ENST00000423567 CALN1Q9BXU9 219 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 KLC2Q9H0B6 622 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 SLC32A1Q9H598 525 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 PCDH18Q9HCL0 1135 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 DMTF1Q9Y222 760 aa11.11□□□□□ -0.63
USP49-204ENST00000423567 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 DOCK4Q8N1I0 1966 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 NUP205Q92621 2012 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 A0A1B0GVT2 93 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 GOLGA6L6A8MZA4 724 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 J3KR12 359 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 NEMP1O14524 444 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 LATO43561 262 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 RNGTTO60942 597 aaKnown RBP11.1□□□□□ -0.63
USP49-204ENST00000423567 ADRB3P13945 408 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 XPAP23025 273 aaPredicted RBP11.1□□□□□ -0.63
USP49-204ENST00000423567 MAT2AP31153 395 aaKnown RBP11.1□□□□□ -0.63
USP49-204ENST00000423567 MAGEA1P43355 309 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 RENBPP51606 427 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 PPP2CBP62714 309 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 PPP2CAP67775 309 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 IL10RBQ08334 325 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 ZNF805Q5CZA5 627 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 PPM1JQ5JR12 505 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 CFAP58Q5T655 872 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms