RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 DDHD2O94830 711 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 GRIA3P42263 894 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 CLCN3P51790 818 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 MBTD1Q05BQ5 628 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 USP10Q14694 798 aaKnown RBP16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 SLC10A6Q3KNW5 377 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 AGKQ53H12 422 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 CNSTQ6PJW8 725 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 EPHX4Q8IUS5 362 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 OR9I1Q8NGQ6 314 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 NDRG1Q92597 394 aaKnown RBP16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 MAELQ96JY0 434 aaKnown RBP16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 GTSE1Q9NYZ3 720 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 BFARQ9NZS9 450 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 KLHL8Q9P2G9 620 aaPredicted RBP16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 CD300AQ9UGN4 299 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 TLL2Q9Y6L7 1015 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 ATP6V1B2P21281 511 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 ATICP31939 592 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 ICAM3P32942 547 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 GRM5P41594 1212 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 GLUD2P49448 558 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 CSRP3P50461 194 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 HMGCS2P54868 508 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 C21orf59P57076 290 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 ANO4Q32M45 955 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 ZNF829Q3KNS6 432 aaPredicted RBP16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 SLC41A1Q8IVJ1 513 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 CENPSQ8N2Z9 138 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 BORCS5Q969J3 196 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 FBXL20Q96IG2 436 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 CPB2Q96IY4 423 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 GJD4Q96KN9 370 aaPredicted RBP16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 TEPSINQ96N21 525 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 SPAG4Q9NPE6 437 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 WDR37Q9Y2I8 494 aa16.87■□□□□ 0.29
NPC1L1-203ENST00000423141 NEMP2A6NFY4 417 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 SLCO1B7G3V0H7 640 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 TPST1O60507 370 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 INHBBP09529 407 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 NMBRP28336 390 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 HK2P52789 917 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 RAB39AQ14964 217 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 DCLRE1AQ6PJP8 1040 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 CHST15Q7LFX5 561 aaPredicted RBP16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 OFCC1Q8IZS5 231 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 C7orf31Q8N865 590 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 ANKFN1Q8N957 763 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 OSBPL2Q9H1P3 480 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 MID2Q9UJV3 735 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 COL4A5P29400 1685 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 MT-CO1P00395 513 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 YBX3P16989 372 aaKnown RBP eCLIP16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 SLC7A2P52569 658 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 OXCT1P55809 520 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 FASTKQ14296 549 aaKnown RBP16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 LY6KQ17RY6 165 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 HSDL1Q3SXM5 330 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 PDCD4Q53EL6 469 aaKnown RBP16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 FAM160B1Q5W0V3 765 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 ZC3HC1Q86WB0 502 aaKnown RBP16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 RDH11Q8TC12 318 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 SPPL2BQ8TCT7 592 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 TOP1MTQ969P6 601 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 PBXIP1Q96AQ6 731 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 NXNL1Q96CM4 212 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 GPR22Q99680 433 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 ADI1Q9BV57 179 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 TEX13BQ9BXU2 312 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 CXCL16Q9H2A7 254 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 DPEP3Q9H4B8 488 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 ZNF277Q9NRM2 450 aaPredicted RBP16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 UBP1Q9NZI7 540 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 AURKCQ9UQB9 309 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 TNFSF13BQ9Y275 285 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 RLFQ13129 1914 aa16.86■□□□□ 0.29
NPC1L1-203ENST00000423141 KDM4FA0A1W2PPD8 638 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 APOA4P06727 396 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 HALP42357 657 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 CD300CQ08708 224 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 RWDD4Q6NW29 188 aaKnown RBP16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 CEP97Q8IW35 865 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 PPP1R10Q96QC0 940 aaKnown RBP16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 TCF12Q99081 682 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 TUBA8Q9NY65 449 aaPredicted RBP16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 CORINQ9Y5Q5 1042 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 SCN4AP35499 1836 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 ZNF701M0R085 212 aaPredicted RBP16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 PPEF2O14830 753 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 AP2A1O95782 977 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 EGFRP00533 1210 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 PGK1P00558 417 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 BMP2P12643 396 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 BCAP31P51572 246 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 BACE1P56817 501 aa16.85■□□□□ 0.29
NPC1L1-203ENST00000423141 TRAP1Q12931 704 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms